link.gene.variant.variables: Link a column of gene variant variables that are found in the...

In TheMillerLab/genetex: BodyMapR

Description

'link.gene.variant.variables()' creates a column of gene variant variables that are found in the REDCap Genomics Instrument

Usage

link.gene.variant.variables(data)

Arguments

data	A Data Frame of Gene Names, Nucleotide Sequences, Amino Acid Sequences and possibly cell-free DNA percentages. This must be a single column data frame, with tidy data (i.e. one name or sequence per cell). These data would like come from a function such as gene.variants.isolate.snapshot()

Value

a data frame with an additional column with gene variant variables for the REDCap Genomic Instrument. The two columns will be labeled, "genes_variants" and "var". These data could then be used as part of a larger function such as gene.variatns.ready.for.redcap.snapshot()

Examples

# Test with embedded data frame "snapshot_sample_report"
snapshot_sample_report %>%
  gene.variants.isolate.snapshot() %>%
  link.gene.variant.variables()

TheMillerLab/genetex documentation built on Dec. 18, 2021, 4:09 p.m.