platform: Use text mining to assing numeric to genomics platforms

Description Usage Arguments Value

View source: R/platform.R

Description

'platform()' applies regular expressions to assign a numerical value for the various platforms used for genomic reports that aligns with the "genomics_platform" field in the REDCAp Genomics Instrument

Usage

1

Arguments

platform

String of the platform used to generate the genomics report. Acceptable strings include: MGH, SNaPshot, BWH, Oncopanel, Guardant, Guardant Health, Foundation or fmi. Case is not sensitive. Required.

Value

numeric value corresponding to the various platforms used to generate genomic reports


TheMillerLab/genetex documentation built on Dec. 18, 2021, 4:09 p.m.