TiphaineCMartin/coMET: coMET: visualisation of regional epigenome-wide association scan (EWAS) results and DNA co-methylation patterns
Visualisation of EWAS results in a genomic region. In addition to phenotype-association P-values, coMET also generates plots of co-methylation patterns and provides a series of annotation tracks. It can be used to other omic-wide association scans as long as the data can be translated to genomic level and for any species.
Getting started
Browse package contents
Package details |
|
|---|---|
| Author | Tiphaine C. Martin [aut,cre], Thomas Hardiman [aut], Idil Yet [aut], Pei-Chien Tsai [aut], Jordana T. Bell [aut] |
| Bioconductor views | ChIPSeq DNAMethylation DNASeq DifferentialMethylation ExomeSeq FunctionalGenomics Genetics GenomeWideAssociation MethylSeq MethylationArray Microarray MotifAnnotation RNASeq RiboSeq Sequencing Software Visualization |
| Maintainer | Tiphaine Martin <tiphaine.martin@mssm.edu> |
| License | GPL (>= 2) |
| Version | 1.27.2 |
| URL | http://epigen.kcl.ac.uk/comet |
| Package repository | View on GitHub |
| Installation |
Install the latest version of this package by entering the following in R:
|
