translate_cigar_index_to_ref_and_query_v2_with_simple_indel_padding: translate_cigar_index_to_ref_and_query_v2_with_simple_indel_padding

In TranslationalBioinformaticsLab/INDELfindR: Indel Detection from Human Genomic Sequence Data

translate_cigar_index_to_ref_and_query_v2_with_simple_indel_padding

Description

translate_cigar_index_to_ref_and_query_v2_with_simple_indel_padding

Usage

translate_cigar_index_to_ref_and_query_v2_with_simple_indel_padding(
  cigar_coords,
  cigar_coords_for_query,
  reference_sequence_for_translation,
  query_sequence_string_for_translation,
  refined_cigar_string
)

Arguments

cigar_coords	cigar_coords
cigar_coords_for_query	cigar_coords_for_query
reference_sequence_for_translation	reference_sequence_for_translation
query_sequence_string_for_translation	query_sequence_string_for_translation
refined_cigar_string	refined_cigar_string

Value

reference_allele_record alternate_allele_record cigar_string_record

TranslationalBioinformaticsLab/INDELfindR documentation built on Nov. 11, 2023, 11:35 p.m.