count_chr_length: count_chr_length
In USDA-ARS-GBRU/crossword: Breeding program similation sotware
View source: R/count_chr_length.R
count_chr_length R Documentation
count_chr_length
Description
The function calculates the chromosomal lengths in bp
It accepts a fasta file of pseudo-molecules and exports a tab delimited file of the chromosome IDs and there length.
Usage
count_chr_length(fa,output)
Arguments
fA
Required: the genome fasta file
output
Required: the output path/name
Value
the genomic location.
Examples
count_chr_length("peanut.fasta","chr_siz.txt")
USDA-ARS-GBRU/crossword documentation built on Oct. 11, 2024, 12:51 a.m.
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View source: R/count_chr_length.R
| count_chr_length | R Documentation |
count_chr_length
Description
The function calculates the chromosomal lengths in bp
It accepts a fasta file of pseudo-molecules and exports a tab delimited file of the chromosome IDs and there length.
Usage
count_chr_length(fa,output)
Arguments
fA |
Required: the genome fasta file |
output |
Required: the output path/name |
Value
the genomic location.
Examples
count_chr_length("peanut.fasta","chr_siz.txt")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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