get_marker_intersection: get_marker_intersection

get_marker_intersectionR Documentation

get_marker_intersection

Description

The function creates marker sub sets from genotype object, three options are available:
1. an input file of a set of markers
2. a phenotype object
3. another genotype object

Usage

get_marker_intersection(genotypes,input_geno_file,pheno,geno)

Arguments

genotypes

Required: input genotype object

input_geno_file

Optional: an input genotype file

pheno

Optional: a phenotype object

geno

Optional: a genotype object

Value

a genotype object of two datasets; genotypes and gen2phy

Examples

get_marker_intersection(genotypes=genotypes,input_geno_file = input_geno_file)

USDA-ARS-GBRU/crossword documentation built on May 23, 2024, 11:45 p.m.