API for VCCRI/XGSA
XGSA: A statistical method for cross-species gene set analysis
| Global functions | |
|---|---|
| .onLoad | Source code |
| XGSA | Man page |
| biomartID | Man page |
| calculate_alternate_genesetlist_complexity | Man page Source code |
| calculate_genesetlist_complexity | Man page Source code |
| check_XGSA_dataset | Man page Source code |
| collapseGO | Man page Source code |
| find_supported_datasets | Man page Source code |
| generate_best_reciprocal_hits_matrix | Man page Source code |
| generate_sparse_matrix | Man page Source code |
| get_ENSEMBL_gene_list | Man page Source code |
| get_ENSEMBL_symbol_map | Man page Source code |
| get_ENSEMBL_trasncript_table | Man page Source code |
| get_GO | Man page Source code |
| get_GO_list_from_ontologies_with_evidence_codes | Man page Source code |
| get_GO_mappings | Man page Source code |
| get_GO_names | Man page Source code |
| get_complex_genes | Man page Source code |
| get_homology_matrix | Man page Source code |
| get_homology_table | Man page Source code |
| get_overlap_genes | Man page Source code |
| new_XGSA_dataset | Man page Source code |
| paired_fishers_exact_tests | Man page Source code |
| run_XGSA_test | Man page Source code |
| xgsa | Man page |
| xgsa-package | Man page |
| xgsa_params | Man page |
