get_GO_mappings: get_GO_mappings
In VCCRI/XGSA: XGSA: A statistical method for cross-species gene set analysis
Description
Usage
Arguments
Details
Value
Examples
Description
This function retrieves the latest Gene Ontology annotations from Ensembl
Usage
1
get_GO_mappings(species)
Arguments
species
Species name in the form 'hsapiens'
Details
This function retrieves the latest Gene Ontology annotations from Ensembl
Value
This function returns a data frame containing Ensembl gene IDs, annotated go terms, GO evidence codes and GO ontology type (BP, MF, CC), in columns 1:4 respectively.
Examples
1
2
human_GO_mappings <- get_GO_mappings('hsapiens')
head(human_GO_mappings)
VCCRI/XGSA documentation built on March 5, 2021, 10:22 p.m.
R Package Documentation
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Description Usage Arguments Details Value Examples
Description
This function retrieves the latest Gene Ontology annotations from Ensembl
Usage
1 | get_GO_mappings(species)
|
Arguments
species |
Species name in the form 'hsapiens' |
Details
This function retrieves the latest Gene Ontology annotations from Ensembl
Value
This function returns a data frame containing Ensembl gene IDs, annotated go terms, GO evidence codes and GO ontology type (BP, MF, CC), in columns 1:4 respectively.
Examples
1 2 | human_GO_mappings <- get_GO_mappings('hsapiens')
head(human_GO_mappings)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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