Files in VCCRI/scTalk
Single-cell talk - an R package for analysis of cell-cell communication networks from single-cell data.
DESCRIPTION
LICENSE
NAMESPACE
R/graph_internal.R
R/main_functions.R
R/plotting.R
README.md
inst/extdata/All.Pairs-Table 1.csv
inst/extdata/STRING_v10_human_ligand-receptor_scores.tsv
inst/extdata/STRING_v10_mouse_ligand-receptor_scores.tsv
inst/extdata/TIP_MI-day7_small.RData
inst/extdata/human_human_ensembl_gene_names.txt
inst/extdata/human_mouse_ensembl_gene_mappings.txt
man/CellCirclePlot.Rd
man/EvaluateConnections.Rd
man/GenerateEdgeWeights.Rd
man/GenerateNetworkPaths.Rd
man/InboundOutboundPlot.Rd
man/NetworkTreePlot.Rd
man/PlotTopLigands.Rd
man/calculate_cluster_specific_expression.Rd
man/get_gene_pair_expression_values.Rd
man/get_weighted_paths.Rd
man/make_STRING_table.Rd
man/randomise_FC_weights.Rd
man/rescale_node_coordinates.Rd
vignettes/TIP_small_circle_plot.png
vignettes/TIP_small_inbound_outbound.png
vignettes/TopLigands.png
vignettes/cartoon.png
vignettes/scTalk_vignette.rmd
vignettes/tree_plot.png
