dot-removeCutoffSites: Remove sites below cutoff probability
In Vitek-Lab/MSstatsPTM: Statistical Characterization of Post-translational Modifications
.removeCutoffSites R Documentation
Remove sites below cutoff probability
Description
Remove sites below cutoff probability
Usage
.removeCutoffSites(data, mod_pep_col, cutoff, remove_unlocalized_peptides)
Arguments
data
data.table
mod_pep_col
column in data with modified sites
cutoff
numeric cutoff. Default is .75.
remove_unlocalized_peptides
Boolean if to remove peptides that
could not be fully localized.
Value
data.table with modifications below cutoff removed
Vitek-Lab/MSstatsPTM documentation built on April 21, 2024, 6:45 a.m.
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| .removeCutoffSites | R Documentation |
Remove sites below cutoff probability
Description
Remove sites below cutoff probability
Usage
.removeCutoffSites(data, mod_pep_col, cutoff, remove_unlocalized_peptides)
Arguments
data |
data.table |
mod_pep_col |
column in data with modified sites |
cutoff |
numeric cutoff. Default is .75. |
remove_unlocalized_peptides |
Boolean if to remove peptides that could not be fully localized. |
Value
data.table with modifications below cutoff removed
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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