aggregateReplicates: Aggregate Replicates
In WeiSong-bio/roryk-bcbioSinglecell: Single-Cell RNA-Seq Utilities
Description
Usage
Arguments
Value
Author(s)
See Also
Examples
Description
Aggregate Replicates
Usage
1
2
## S4 method for signature 'bcbioSingleCell'
aggregateReplicates(object)
Arguments
object
Object.
Value
SingleCellExperiment.
Author(s)
Michael Steinbaugh, Rory Kirchner
See Also
Other Data Functions: cell2sample,
fetchGeneData,
mapCellsToSamples,
metricsPerSample, sampleData,
selectSamples,
subsetPerSample, topBarcodes
Examples
1
2
3
4
5
6
7
8
9
10
# bcbioSingleCell ====
object <- indrops_small
sampleNames(object)
# Define groupings factor as`aggregate` column in `colData()`
glimpse(object$aggregate)
x <- aggregateReplicates(object)
show(x)
sampleNames(x)
WeiSong-bio/roryk-bcbioSinglecell documentation built on July 6, 2019, 12:03 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value Author(s) See Also Examples
Description
Aggregate Replicates
Usage
1 2 | ## S4 method for signature 'bcbioSingleCell'
aggregateReplicates(object)
|
Arguments
object |
Object. |
Value
SingleCellExperiment.
Author(s)
Michael Steinbaugh, Rory Kirchner
See Also
Other Data Functions: cell2sample,
fetchGeneData,
mapCellsToSamples,
metricsPerSample, sampleData,
selectSamples,
subsetPerSample, topBarcodes
Examples
1 2 3 4 5 6 7 8 9 10 | # bcbioSingleCell ====
object <- indrops_small
sampleNames(object)
# Define groupings factor as`aggregate` column in `colData()`
glimpse(object$aggregate)
x <- aggregateReplicates(object)
show(x)
sampleNames(x)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.