evalLogLikNB_comp: Compiled function: evalLogLikNB

Description Usage Arguments Value Author(s) See Also

Description

Pre-compile heavily used functions. Refer to evalLogLikNB

Usage

1
evalLogLikNB_comp(vecCounts, vecMu, vecDisp, vecidxNotZero, vecidxZero)

Arguments

vecCounts

(count vector number of samples) Observed read counts, not observed are NA.

vecMu

(vector number of samples) Negative binomial mean parameter.

vecDisp

(scalar vector number of samples) Negative binomial dispersion parameters.

vecidxNotZero

(bool vector number of samples) Whether observation is larger than zero.

vecidxZero

(bool vector number of samples) Whether observation is zero.

Value

scaLogLik (scalar) Likelihood under zero-inflated negative binomial model.

Author(s)

David Sebastian Fischer

See Also

evalLogLikNB


YosefLab/LineagePulse documentation built on May 6, 2019, 2:19 p.m.