tests/testthat/_snaps/experiment.md
In Yu-Group/simChef: Intensive Computational Experiments Made Easy
Generate data from Experiment works properly
$DGP1
$DGP1[[1]]
$DGP1[[1]][[1]]
$DGP1[[1]][[1]][[1]]
[1] 2
attr(,"params")
attr(,"params")$x
[1] 1
$DGP1[[2]]
$DGP1[[2]][[1]]
$DGP1[[2]][[1]][[1]]
[1] 3
attr(,"params")
attr(,"params")$x
[1] 2
$DGP2
$DGP2[[1]]
$DGP2[[1]][[1]]
$DGP2[[1]][[1]][[1]]
[1] 3
attr(,"params")
named list()
$DGP1
$DGP1[[1]]
$DGP1[[1]][[1]]
$DGP1[[1]][[1]][[1]]
[1] 2
$DGP1[[1]][[2]]
$DGP1[[1]][[2]][[1]]
[1] 2
$DGP1[[1]][[3]]
$DGP1[[1]][[3]][[1]]
[1] 2
attr(,"params")
attr(,"params")$x
[1] 1
$DGP1[[2]]
$DGP1[[2]][[1]]
$DGP1[[2]][[1]][[1]]
[1] 3
$DGP1[[2]][[2]]
$DGP1[[2]][[2]][[1]]
[1] 3
$DGP1[[2]][[3]]
$DGP1[[2]][[3]][[1]]
[1] 3
attr(,"params")
attr(,"params")$x
[1] 2
$DGP2
$DGP2[[1]]
$DGP2[[1]][[1]]
$DGP2[[1]][[1]][[1]]
[1] 3
$DGP2[[1]][[2]]
$DGP2[[1]][[2]][[1]]
[1] 3
$DGP2[[1]][[3]]
$DGP2[[1]][[3]][[1]]
[1] 3
attr(,"params")
named list()
$DGP1
$DGP1[[1]]
$DGP1[[1]][[1]]
$DGP1[[1]][[1]][[1]]
[1] 2
attr(,"params")
attr(,"params")$x
[1] 1
$DGP1[[2]]
$DGP1[[2]][[1]]
$DGP1[[2]][[1]][[1]]
[1] 3
attr(,"params")
attr(,"params")$x
[1] 2
$DGP2
$DGP2[[1]]
$DGP2[[1]][[1]]
$DGP2[[1]][[1]][[1]]
[1] 3
attr(,"params")
attr(,"params")$x
[1] 1
$DGP2[[2]]
$DGP2[[2]][[1]]
$DGP2[[2]][[1]][[1]]
[1] 4
attr(,"params")
attr(,"params")$x
[1] 2
$DGP2[[3]]
$DGP2[[3]][[1]]
$DGP2[[3]][[1]][[1]]
[1] 5
attr(,"params")
attr(,"params")$x
[1] 3
$DGP1
$DGP1[[1]]
$DGP1[[1]][[1]]
$DGP1[[1]][[1]][[1]]
[1] 2
$DGP1[[1]][[2]]
$DGP1[[1]][[2]][[1]]
[1] 2
$DGP1[[1]][[3]]
$DGP1[[1]][[3]][[1]]
[1] 2
attr(,"params")
attr(,"params")$x
[1] 1
$DGP1[[2]]
$DGP1[[2]][[1]]
$DGP1[[2]][[1]][[1]]
[1] 3
$DGP1[[2]][[2]]
$DGP1[[2]][[2]][[1]]
[1] 3
$DGP1[[2]][[3]]
$DGP1[[2]][[3]][[1]]
[1] 3
attr(,"params")
attr(,"params")$x
[1] 2
$DGP2
$DGP2[[1]]
$DGP2[[1]][[1]]
$DGP2[[1]][[1]][[1]]
[1] 3
$DGP2[[1]][[2]]
$DGP2[[1]][[2]][[1]]
[1] 3
$DGP2[[1]][[3]]
$DGP2[[1]][[3]][[1]]
[1] 3
attr(,"params")
attr(,"params")$x
[1] 1
$DGP2[[2]]
$DGP2[[2]][[1]]
$DGP2[[2]][[1]][[1]]
[1] 4
$DGP2[[2]][[2]]
$DGP2[[2]][[2]][[1]]
[1] 4
$DGP2[[2]][[3]]
$DGP2[[2]][[3]][[1]]
[1] 4
attr(,"params")
attr(,"params")$x
[1] 2
$DGP2[[3]]
$DGP2[[3]][[1]]
$DGP2[[3]][[1]][[1]]
[1] 5
$DGP2[[3]][[2]]
$DGP2[[3]][[2]][[1]]
[1] 5
$DGP2[[3]][[3]]
$DGP2[[3]][[3]][[1]]
[1] 5
attr(,"params")
attr(,"params")$x
[1] 3
$DGP1
$DGP1[[1]]
$DGP1[[1]][[1]]
$DGP1[[1]][[1]][[1]]
[1] 2
attr(,"params")
attr(,"params")$x
[1] 1
attr(,"params")$y
[1] 1
$DGP1[[2]]
$DGP1[[2]][[1]]
$DGP1[[2]][[1]][[1]]
[1] 2
attr(,"params")
attr(,"params")$x
[1] 1
attr(,"params")$y
[1] 2
$DGP1[[3]]
$DGP1[[3]][[1]]
$DGP1[[3]][[1]][[1]]
[1] 3
attr(,"params")
attr(,"params")$x
[1] 2
attr(,"params")$y
[1] 1
$DGP1[[4]]
$DGP1[[4]][[1]]
$DGP1[[4]][[1]][[1]]
[1] 3
attr(,"params")
attr(,"params")$x
[1] 2
attr(,"params")$y
[1] 2
$DGP2
$DGP2[[1]]
$DGP2[[1]][[1]]
$DGP2[[1]][[1]][[1]]
[1] 3
attr(,"params")
attr(,"params")$x
[1] 1
$DGP2[[2]]
$DGP2[[2]][[1]]
$DGP2[[2]][[1]][[1]]
[1] 4
attr(,"params")
attr(,"params")$x
[1] 2
$DGP2[[3]]
$DGP2[[3]][[1]]
$DGP2[[3]][[1]][[1]]
[1] 5
attr(,"params")
attr(,"params")$x
[1] 3
$DGP1
$DGP1[[1]]
$DGP1[[1]][[1]]
$DGP1[[1]][[1]][[1]]
[1] 2
$DGP1[[1]][[2]]
$DGP1[[1]][[2]][[1]]
[1] 2
attr(,"params")
attr(,"params")$x
[1] 1
attr(,"params")$y
[1] 1
$DGP1[[2]]
$DGP1[[2]][[1]]
$DGP1[[2]][[1]][[1]]
[1] 2
$DGP1[[2]][[2]]
$DGP1[[2]][[2]][[1]]
[1] 2
attr(,"params")
attr(,"params")$x
[1] 1
attr(,"params")$y
[1] 2
$DGP1[[3]]
$DGP1[[3]][[1]]
$DGP1[[3]][[1]][[1]]
[1] 3
$DGP1[[3]][[2]]
$DGP1[[3]][[2]][[1]]
[1] 3
attr(,"params")
attr(,"params")$x
[1] 2
attr(,"params")$y
[1] 1
$DGP1[[4]]
$DGP1[[4]][[1]]
$DGP1[[4]][[1]][[1]]
[1] 3
$DGP1[[4]][[2]]
$DGP1[[4]][[2]][[1]]
[1] 3
attr(,"params")
attr(,"params")$x
[1] 2
attr(,"params")$y
[1] 2
$DGP2
$DGP2[[1]]
$DGP2[[1]][[1]]
$DGP2[[1]][[1]][[1]]
[1] 3
$DGP2[[1]][[2]]
$DGP2[[1]][[2]][[1]]
[1] 3
attr(,"params")
attr(,"params")$x
[1] 1
$DGP2[[2]]
$DGP2[[2]][[1]]
$DGP2[[2]][[1]][[1]]
[1] 4
$DGP2[[2]][[2]]
$DGP2[[2]][[2]][[1]]
[1] 4
attr(,"params")
attr(,"params")$x
[1] 2
$DGP2[[3]]
$DGP2[[3]][[1]]
$DGP2[[3]][[1]][[1]]
[1] 5
$DGP2[[3]][[2]]
$DGP2[[3]][[2]][[1]]
[1] 5
attr(,"params")
attr(,"params")$x
[1] 3
Fitting experiment works properly
# A tibble: 3 x 7
.rep .dgp_name .method_name scalar vector matrix tibble
<chr> <chr> <chr> <dbl> <list> <list> <list>
1 1 DGP2 Method2 5 <dbl [3]> <int [4 x 2]> <tibble [3 x 2]>
2 2 DGP2 Method2 5 <dbl [3]> <int [4 x 2]> <tibble [3 x 2]>
3 3 DGP2 Method2 5 <dbl [3]> <int [4 x 2]> <tibble [3 x 2]>
# A tibble: 12 x 8
.rep .dgp_name .method_name result1 scalar vector matrix tibble
<chr> <chr> <chr> <dbl> <dbl> <list> <list> <list>
1 1 DGP1 Method1 2 NA <NULL> <NULL> <NULL>
2 1 DGP1 Method2 NA 4 <NULL> <int [4 x 2]> <tibble>
3 1 DGP2 Method1 3 NA <NULL> <NULL> <NULL>
4 1 DGP2 Method2 NA 5 <dbl [3]> <int [4 x 2]> <tibble>
5 2 DGP1 Method1 2 NA <NULL> <NULL> <NULL>
6 2 DGP1 Method2 NA 4 <NULL> <int [4 x 2]> <tibble>
7 2 DGP2 Method1 3 NA <NULL> <NULL> <NULL>
8 2 DGP2 Method2 NA 5 <dbl [3]> <int [4 x 2]> <tibble>
9 3 DGP1 Method1 2 NA <NULL> <NULL> <NULL>
10 3 DGP1 Method2 NA 4 <NULL> <int [4 x 2]> <tibble>
11 3 DGP2 Method1 3 NA <NULL> <NULL> <NULL>
12 3 DGP2 Method2 NA 5 <dbl [3]> <int [4 x 2]> <tibble>
Printing Experiment works properly
Experiment Name: test-print
Saved results at: results/test-print
DGPs:
Methods:
Evaluators:
Visualizers:
Vary Across: None
Experiment Name: test-print
Saved results at: results/test-print
DGPs: DGP1, DGP2
Methods: Method1
Evaluators: Evaluator1, Evaluator2, Evaluator3
Visualizers:
Vary Across: None
Experiment Name: test-print
Saved results at: results/test-print
DGPs: DGP1, DGP2
Methods: Method1
Evaluators: Evaluator1, Evaluator2, Evaluator3
Visualizers: Visualizer1
Vary Across: None
Experiment Name: test-print
Saved results at: results/test-print
DGPs: DGP1, DGP2
Methods: Method1
Evaluators: Evaluator1, Evaluator2, Evaluator3
Visualizers: Visualizer1
Vary Across:
DGP: DGP1
x: int [1:3] 1 2 3
Experiment Name: test-print
Saved results at: results/test-print
DGPs: DGP1, DGP2
Methods: Method1
Evaluators: Evaluator1, Evaluator2, Evaluator3
Visualizers: Visualizer1
Vary Across:
Method: Method1
x: int [1:3] 1 2 3
Experiment Name: test-print
Saved results at: results/test-print
DGPs: DGP1, DGP2
Methods: Method1
Evaluators: Evaluator1, Evaluator2, Evaluator3
Visualizers: Visualizer1
Vary Across:
DGP: DGP1
x: int [1:3] 1 2 3
DGP: DGP2
x: int [1:3] 2 3 4
Method: Method1
x: int [1:3] 1 2 3
Experiment Name: test-print
Saved results at: results/test-print
DGPs: DGP1, DGP2
Methods: Method1
Evaluators: Evaluator1, Evaluator2, Evaluator3
Visualizers: Visualizer1
Vary Across:
DGP: DGP1
x: List of 1
$ : int [1:3] 1 2 3
DGP: DGP2
x: List of 1
$ : int [1:3] 2 3 4
Method: Method1
x: int [1:3] 1 2 3
Capturing errors, warnings, and messages from user-defined functions works as expected
Code
invisible(experiment$fit(n_reps = 2))
Message <simChef_message>
Fitting error-tracking...
Warning <simpleWarning>
rho must be greater than 0.5
Message <simpleMessage>
3 isn't in vec
3 isn't in vec
Warning <simpleWarning>
rho must be greater than 0.5
Message <simpleMessage>
3 isn't in vec
3 isn't in vec
Warning <simpleWarning>
rho must be greater than 0.5
Message <simpleMessage>
3 isn't in vec
3 isn't in vec
Warning <simpleWarning>
rho must be greater than 0.5
Message <simpleMessage>
3 isn't in vec
3 isn't in vec
3 isn't in vec
3 isn't in vec
3 isn't in vec
3 isn't in vec
Warning <simpleWarning>
rho must be greater than 0.5
Message <simpleMessage>
3 isn't in vec
3 isn't in vec
Warning <simpleWarning>
rho must be greater than 0.5
Message <simpleMessage>
3 isn't in vec
3 isn't in vec
Warning <simpleWarning>
rho must be greater than 0.5
Message <simpleMessage>
3 isn't in vec
3 isn't in vec
Warning <simpleWarning>
rho must be greater than 0.5
Message <simpleMessage>
3 isn't in vec
3 isn't in vec
3 isn't in vec
3 isn't in vec
3 isn't in vec
3 isn't in vec
Message <simChef_message>
2 reps completed (totals: 2/2) | time taken: _x_ minutes
==============================
Code
invisible(fit_results <- experiment$fit(n_reps = 2, verbose = 2))
Message <simChef_message>
Fitting error-tracking...
Warning <simChef_warning>
rho must be greater than 0.5
The above warning occurred while processing "dgp1" with the following params:
$ rho : num 0.2
$ noise_level: num 1
Warning <simpleWarning>
rho must be greater than 0.5
Message <simChef_message>
The message below occurred while processing "method_test" with the following params:
$ param2 : num 2
$ vec : int [1:4] 4 5 6 7
$ data_list:List of 1
..$ X:'data.frame': 1 obs. of 3 variables:
.. ..$ .n : num 10
.. ..$ .rho : num 0.2
.. ..$ .noise_level: num 1
$ .simplify: logi FALSE
Message <simpleMessage>
3 isn't in vec
Message <simChef_message>
The message below occurred while processing "method_test" with the following params:
$ param2 : num 4
$ vec : int [1:4] 4 5 6 7
$ data_list:List of 1
..$ X:'data.frame': 1 obs. of 3 variables:
.. ..$ .n : num 10
.. ..$ .rho : num 0.2
.. ..$ .noise_level: num 1
$ .simplify: logi FALSE
Message <simpleMessage>
3 isn't in vec
Warning <simChef_warning>
rho must be greater than 0.5
The above warning occurred while processing "dgp1" with the following params:
$ rho : num 0.2
$ noise_level: num 2
Warning <simpleWarning>
rho must be greater than 0.5
Message <simChef_message>
The message below occurred while processing "method_test" with the following params:
$ param2 : num 2
$ vec : int [1:4] 4 5 6 7
$ data_list:List of 1
..$ X:'data.frame': 1 obs. of 3 variables:
.. ..$ .n : num 10
.. ..$ .rho : num 0.2
.. ..$ .noise_level: num 2
$ .simplify: logi FALSE
Message <simpleMessage>
3 isn't in vec
Message <simChef_message>
The message below occurred while processing "method_test" with the following params:
$ param2 : num 4
$ vec : int [1:4] 4 5 6 7
$ data_list:List of 1
..$ X:'data.frame': 1 obs. of 3 variables:
.. ..$ .n : num 10
.. ..$ .rho : num 0.2
.. ..$ .noise_level: num 2
$ .simplify: logi FALSE
Message <simpleMessage>
3 isn't in vec
Warning <simChef_warning>
rho must be greater than 0.5
The above warning occurred while processing "dgp_test" with the following params:
$ rho : num 0.2
$ noise_level: num 1
Warning <simpleWarning>
rho must be greater than 0.5
Message <simChef_message>
The message below occurred while processing "method_test" with the following params:
$ param2 : num 2
$ vec : int [1:4] 4 5 6 7
$ data_list:List of 1
..$ X:'data.frame': 1 obs. of 3 variables:
.. ..$ .n : num 10
.. ..$ .rho : num 0.2
.. ..$ .noise_level: num 1
$ .simplify: logi FALSE
Message <simpleMessage>
3 isn't in vec
Message <simChef_message>
The message below occurred while processing "method_test" with the following params:
$ param2 : num 4
$ vec : int [1:4] 4 5 6 7
$ data_list:List of 1
..$ X:'data.frame': 1 obs. of 3 variables:
.. ..$ .n : num 10
.. ..$ .rho : num 0.2
.. ..$ .noise_level: num 1
$ .simplify: logi FALSE
Message <simpleMessage>
3 isn't in vec
Warning <simChef_warning>
rho must be greater than 0.5
The above warning occurred while processing "dgp_test" with the following params:
$ rho : num 0.2
$ noise_level: num 2
Warning <simpleWarning>
rho must be greater than 0.5
Message <simChef_message>
The message below occurred while processing "method_test" with the following params:
$ param2 : num 2
$ vec : int [1:4] 4 5 6 7
$ data_list:List of 1
..$ X:'data.frame': 1 obs. of 3 variables:
.. ..$ .n : num 10
.. ..$ .rho : num 0.2
.. ..$ .noise_level: num 2
$ .simplify: logi FALSE
Message <simpleMessage>
3 isn't in vec
Message <simChef_message>
The message below occurred while processing "method_test" with the following params:
$ param2 : num 4
$ vec : int [1:4] 4 5 6 7
$ data_list:List of 1
..$ X:'data.frame': 1 obs. of 3 variables:
.. ..$ .n : num 10
.. ..$ .rho : num 0.2
.. ..$ .noise_level: num 2
$ .simplify: logi FALSE
Message <simpleMessage>
3 isn't in vec
Message <simChef_message>
The message below occurred while processing "method_test" with the following params:
$ param2 : num 2
$ vec : int [1:4] 4 5 6 7
$ data_list:List of 1
..$ X:'data.frame': 1 obs. of 3 variables:
.. ..$ .n : num 10
.. ..$ .rho : num 0.9
.. ..$ .noise_level: num 1
$ .simplify: logi FALSE
Message <simpleMessage>
3 isn't in vec
Message <simChef_message>
The message below occurred while processing "method_test" with the following params:
$ param2 : num 4
$ vec : int [1:4] 4 5 6 7
$ data_list:List of 1
..$ X:'data.frame': 1 obs. of 3 variables:
.. ..$ .n : num 10
.. ..$ .rho : num 0.9
.. ..$ .noise_level: num 1
$ .simplify: logi FALSE
Message <simpleMessage>
3 isn't in vec
Message <simChef_message>
The message below occurred while processing "method_test" with the following params:
$ param2 : num 2
$ vec : int [1:4] 4 5 6 7
$ data_list:List of 1
..$ X:'data.frame': 1 obs. of 3 variables:
.. ..$ .n : num 10
.. ..$ .rho : num 0.9
.. ..$ .noise_level: num 2
$ .simplify: logi FALSE
Message <simpleMessage>
3 isn't in vec
Message <simChef_message>
The message below occurred while processing "method_test" with the following params:
$ param2 : num 4
$ vec : int [1:4] 4 5 6 7
$ data_list:List of 1
..$ X:'data.frame': 1 obs. of 3 variables:
.. ..$ .n : num 10
.. ..$ .rho : num 0.9
.. ..$ .noise_level: num 2
$ .simplify: logi FALSE
Message <simpleMessage>
3 isn't in vec
Warning <simChef_warning>
rho must be greater than 0.5
The above warning occurred while processing "dgp1" with the following params:
$ rho : num 0.2
$ noise_level: num 1
Warning <simpleWarning>
rho must be greater than 0.5
Message <simChef_message>
The message below occurred while processing "method_test" with the following params:
$ param2 : num 2
$ vec : int [1:4] 4 5 6 7
$ data_list:List of 1
..$ X:'data.frame': 1 obs. of 3 variables:
.. ..$ .n : num 10
.. ..$ .rho : num 0.2
.. ..$ .noise_level: num 1
$ .simplify: logi FALSE
Message <simpleMessage>
3 isn't in vec
Message <simChef_message>
The message below occurred while processing "method_test" with the following params:
$ param2 : num 4
$ vec : int [1:4] 4 5 6 7
$ data_list:List of 1
..$ X:'data.frame': 1 obs. of 3 variables:
.. ..$ .n : num 10
.. ..$ .rho : num 0.2
.. ..$ .noise_level: num 1
$ .simplify: logi FALSE
Message <simpleMessage>
3 isn't in vec
Warning <simChef_warning>
rho must be greater than 0.5
The above warning occurred while processing "dgp1" with the following params:
$ rho : num 0.2
$ noise_level: num 2
Warning <simpleWarning>
rho must be greater than 0.5
Message <simChef_message>
The message below occurred while processing "method_test" with the following params:
$ param2 : num 2
$ vec : int [1:4] 4 5 6 7
$ data_list:List of 1
..$ X:'data.frame': 1 obs. of 3 variables:
.. ..$ .n : num 10
.. ..$ .rho : num 0.2
.. ..$ .noise_level: num 2
$ .simplify: logi FALSE
Message <simpleMessage>
3 isn't in vec
Message <simChef_message>
The message below occurred while processing "method_test" with the following params:
$ param2 : num 4
$ vec : int [1:4] 4 5 6 7
$ data_list:List of 1
..$ X:'data.frame': 1 obs. of 3 variables:
.. ..$ .n : num 10
.. ..$ .rho : num 0.2
.. ..$ .noise_level: num 2
$ .simplify: logi FALSE
Message <simpleMessage>
3 isn't in vec
Warning <simChef_warning>
rho must be greater than 0.5
The above warning occurred while processing "dgp_test" with the following params:
$ rho : num 0.2
$ noise_level: num 1
Warning <simpleWarning>
rho must be greater than 0.5
Message <simChef_message>
The message below occurred while processing "method_test" with the following params:
$ param2 : num 2
$ vec : int [1:4] 4 5 6 7
$ data_list:List of 1
..$ X:'data.frame': 1 obs. of 3 variables:
.. ..$ .n : num 10
.. ..$ .rho : num 0.2
.. ..$ .noise_level: num 1
$ .simplify: logi FALSE
Message <simpleMessage>
3 isn't in vec
Message <simChef_message>
The message below occurred while processing "method_test" with the following params:
$ param2 : num 4
$ vec : int [1:4] 4 5 6 7
$ data_list:List of 1
..$ X:'data.frame': 1 obs. of 3 variables:
.. ..$ .n : num 10
.. ..$ .rho : num 0.2
.. ..$ .noise_level: num 1
$ .simplify: logi FALSE
Message <simpleMessage>
3 isn't in vec
Warning <simChef_warning>
rho must be greater than 0.5
The above warning occurred while processing "dgp_test" with the following params:
$ rho : num 0.2
$ noise_level: num 2
Warning <simpleWarning>
rho must be greater than 0.5
Message <simChef_message>
The message below occurred while processing "method_test" with the following params:
$ param2 : num 2
$ vec : int [1:4] 4 5 6 7
$ data_list:List of 1
..$ X:'data.frame': 1 obs. of 3 variables:
.. ..$ .n : num 10
.. ..$ .rho : num 0.2
.. ..$ .noise_level: num 2
$ .simplify: logi FALSE
Message <simpleMessage>
3 isn't in vec
Message <simChef_message>
The message below occurred while processing "method_test" with the following params:
$ param2 : num 4
$ vec : int [1:4] 4 5 6 7
$ data_list:List of 1
..$ X:'data.frame': 1 obs. of 3 variables:
.. ..$ .n : num 10
.. ..$ .rho : num 0.2
.. ..$ .noise_level: num 2
$ .simplify: logi FALSE
Message <simpleMessage>
3 isn't in vec
Message <simChef_message>
The message below occurred while processing "method_test" with the following params:
$ param2 : num 2
$ vec : int [1:4] 4 5 6 7
$ data_list:List of 1
..$ X:'data.frame': 1 obs. of 3 variables:
.. ..$ .n : num 10
.. ..$ .rho : num 0.9
.. ..$ .noise_level: num 1
$ .simplify: logi FALSE
Message <simpleMessage>
3 isn't in vec
Message <simChef_message>
The message below occurred while processing "method_test" with the following params:
$ param2 : num 4
$ vec : int [1:4] 4 5 6 7
$ data_list:List of 1
..$ X:'data.frame': 1 obs. of 3 variables:
.. ..$ .n : num 10
.. ..$ .rho : num 0.9
.. ..$ .noise_level: num 1
$ .simplify: logi FALSE
Message <simpleMessage>
3 isn't in vec
Message <simChef_message>
The message below occurred while processing "method_test" with the following params:
$ param2 : num 2
$ vec : int [1:4] 4 5 6 7
$ data_list:List of 1
..$ X:'data.frame': 1 obs. of 3 variables:
.. ..$ .n : num 10
.. ..$ .rho : num 0.9
.. ..$ .noise_level: num 2
$ .simplify: logi FALSE
Message <simpleMessage>
3 isn't in vec
Message <simChef_message>
The message below occurred while processing "method_test" with the following params:
$ param2 : num 4
$ vec : int [1:4] 4 5 6 7
$ data_list:List of 1
..$ X:'data.frame': 1 obs. of 3 variables:
.. ..$ .n : num 10
.. ..$ .rho : num 0.9
.. ..$ .noise_level: num 2
$ .simplify: logi FALSE
Message <simpleMessage>
3 isn't in vec
Message <simChef_message>
2 reps completed (totals: 2/2) | time taken: _x_ minutes
==============================
Code
invisible(experiment$evaluate(fit_results))
Message <simChef_message>
Evaluating error-tracking...
Warning <simpleWarning>
that's a lot of rows
Message <simChef_message>
Evaluation completed | time taken: _x_ minutes
==============================
Code
invisible(eval_results <- experiment$evaluate(fit_results, verbose = 2))
Message <simChef_message>
Evaluating error-tracking...
Warning <simChef_warning>
that's a lot of rows
The above warning occurred while processing "evaluator1" with the following params:
$ fit_results: tibble [48 x 10] (S3: tbl_df/tbl/data.frame)
..$ .rep : chr [1:48] "1" "1" "1" "1" ...
..$ .dgp_name : chr [1:48] "dgp1" "dgp1" "dgp1" "dgp1" ...
..$ .method_name: chr [1:48] "method_test" "method_test" "method_test" "method_test" ...
..$ rho : num [1:48] 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.2 ...
..$ noise_level : num [1:48] 1 1 1 1 2 2 2 2 1 1 ...
..$ param2 : num [1:48] 2 2 4 4 2 2 4 4 2 2 ...
..$ vec :List of 48
..$ .n : num [1:48] 10 10 10 10 10 10 10 10 10 10 ...
..$ .rho : num [1:48] 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.2 ...
..$ .noise_level: num [1:48] 1 1 1 1 2 2 2 2 1 1 ...
$ vary_params: chr [1:6] "rho" "noise_level" "rho" "noise_level" ...
Warning <simpleWarning>
that's a lot of rows
Message <simChef_message>
Evaluation completed | time taken: _x_ minutes
==============================
Code
invisible(experiment$visualize(fit_results, eval_results))
Message <simChef_message>
Visualizing error-tracking...
Warning <simpleWarning>
False alarm!
Message <simChef_message>
Visualization completed | time taken: _x_ minutes
==============================
Code
invisible(viz_results <- experiment$visualize(fit_results, eval_results,
verbose = 2))
Message <simChef_message>
Visualizing error-tracking...
Warning <simChef_warning>
False alarm!
The above warning occurred while processing "visualizer1" with the following params:
$ fit_results : tibble [48 x 10] (S3: tbl_df/tbl/data.frame)
..$ .rep : chr [1:48] "1" "1" "1" "1" ...
..$ .dgp_name : chr [1:48] "dgp1" "dgp1" "dgp1" "dgp1" ...
..$ .method_name: chr [1:48] "method_test" "method_test" "method_test" "method_test" ...
..$ rho : num [1:48] 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.2 ...
..$ noise_level : num [1:48] 1 1 1 1 2 2 2 2 1 1 ...
..$ param2 : num [1:48] 2 2 4 4 2 2 4 4 2 2 ...
..$ vec :List of 48
..$ .n : num [1:48] 10 10 10 10 10 10 10 10 10 10 ...
..$ .rho : num [1:48] 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.2 ...
..$ .noise_level: num [1:48] 1 1 1 1 2 2 2 2 1 1 ...
$ eval_results:List of 1
..$ evaluator1: tibble [1 x 10] (S3: tbl_df/tbl/data.frame)
$ vary_params : chr [1:6] "rho" "noise_level" "rho" "noise_level" ...
Warning <simpleWarning>
False alarm!
Message <simChef_message>
Visualization completed | time taken: _x_ minutes
==============================
Code
invisible(experiment$visualize(fit_results, eval_results, verbose = 2))
Message <simChef_message>
Visualizing error-tracking...
Warning <simChef_warning>
False alarm!
The above warning occurred while processing "visualizer1" with the following params:
$ fit_results : tibble [48 x 10] (S3: tbl_df/tbl/data.frame)
..$ .rep : chr [1:48] "1" "1" "1" "1" ...
..$ .dgp_name : chr [1:48] "dgp1" "dgp1" "dgp1" "dgp1" ...
..$ .method_name: chr [1:48] "method_test" "method_test" "method_test" "method_test" ...
..$ rho : num [1:48] 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.2 ...
..$ noise_level : num [1:48] 1 1 1 1 2 2 2 2 1 1 ...
..$ param2 : num [1:48] 2 2 4 4 2 2 4 4 2 2 ...
..$ vec :List of 48
..$ .n : num [1:48] 10 10 10 10 10 10 10 10 10 10 ...
..$ .rho : num [1:48] 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.2 ...
..$ .noise_level: num [1:48] 1 1 1 1 2 2 2 2 1 1 ...
$ eval_results:List of 1
..$ evaluator1: tibble [1 x 10] (S3: tbl_df/tbl/data.frame)
$ vary_params : chr [1:6] "rho" "noise_level" "rho" "noise_level" ...
Warning <simpleWarning>
False alarm!
Error <rlang_error>
i In index: 2.
Caused by error in `.f()`:
! Oh no!
The above error occurred while processing "visualizer2" with the following params:
$ fit_results : tibble [48 x 10] (S3: tbl_df/tbl/data.frame)
..$ .rep : chr [1:48] "1" "1" "1" "1" ...
..$ .dgp_name : chr [1:48] "dgp1" "dgp1" "dgp1" "dgp1" ...
..$ .method_name: chr [1:48] "method_test" "method_test" "method_test" "method_test" ...
..$ rho : num [1:48] 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.2 ...
..$ noise_level : num [1:48] 1 1 1 1 2 2 2 2 1 1 ...
..$ param2 : num [1:48] 2 2 4 4 2 2 4 4 2 2 ...
..$ vec :List of 48
..$ .n : num [1:48] 10 10 10 10 10 10 10 10 10 10 ...
..$ .rho : num [1:48] 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.2 ...
..$ .noise_level: num [1:48] 1 1 1 1 2 2 2 2 1 1 ...
$ eval_results:List of 1
..$ evaluator1: tibble [1 x 10] (S3: tbl_df/tbl/data.frame)
$ vary_params : chr [1:6] "rho" "noise_level" "rho" "noise_level" ...
Caused by error:
! Oh no!
Yu-Group/simChef documentation built on March 25, 2024, 3:22 a.m.
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Generate data from Experiment works properly
$DGP1
$DGP1[[1]]
$DGP1[[1]][[1]]
$DGP1[[1]][[1]][[1]]
[1] 2
attr(,"params")
attr(,"params")$x
[1] 1
$DGP1[[2]]
$DGP1[[2]][[1]]
$DGP1[[2]][[1]][[1]]
[1] 3
attr(,"params")
attr(,"params")$x
[1] 2
$DGP2
$DGP2[[1]]
$DGP2[[1]][[1]]
$DGP2[[1]][[1]][[1]]
[1] 3
attr(,"params")
named list()
$DGP1
$DGP1[[1]]
$DGP1[[1]][[1]]
$DGP1[[1]][[1]][[1]]
[1] 2
$DGP1[[1]][[2]]
$DGP1[[1]][[2]][[1]]
[1] 2
$DGP1[[1]][[3]]
$DGP1[[1]][[3]][[1]]
[1] 2
attr(,"params")
attr(,"params")$x
[1] 1
$DGP1[[2]]
$DGP1[[2]][[1]]
$DGP1[[2]][[1]][[1]]
[1] 3
$DGP1[[2]][[2]]
$DGP1[[2]][[2]][[1]]
[1] 3
$DGP1[[2]][[3]]
$DGP1[[2]][[3]][[1]]
[1] 3
attr(,"params")
attr(,"params")$x
[1] 2
$DGP2
$DGP2[[1]]
$DGP2[[1]][[1]]
$DGP2[[1]][[1]][[1]]
[1] 3
$DGP2[[1]][[2]]
$DGP2[[1]][[2]][[1]]
[1] 3
$DGP2[[1]][[3]]
$DGP2[[1]][[3]][[1]]
[1] 3
attr(,"params")
named list()
$DGP1
$DGP1[[1]]
$DGP1[[1]][[1]]
$DGP1[[1]][[1]][[1]]
[1] 2
attr(,"params")
attr(,"params")$x
[1] 1
$DGP1[[2]]
$DGP1[[2]][[1]]
$DGP1[[2]][[1]][[1]]
[1] 3
attr(,"params")
attr(,"params")$x
[1] 2
$DGP2
$DGP2[[1]]
$DGP2[[1]][[1]]
$DGP2[[1]][[1]][[1]]
[1] 3
attr(,"params")
attr(,"params")$x
[1] 1
$DGP2[[2]]
$DGP2[[2]][[1]]
$DGP2[[2]][[1]][[1]]
[1] 4
attr(,"params")
attr(,"params")$x
[1] 2
$DGP2[[3]]
$DGP2[[3]][[1]]
$DGP2[[3]][[1]][[1]]
[1] 5
attr(,"params")
attr(,"params")$x
[1] 3
$DGP1
$DGP1[[1]]
$DGP1[[1]][[1]]
$DGP1[[1]][[1]][[1]]
[1] 2
$DGP1[[1]][[2]]
$DGP1[[1]][[2]][[1]]
[1] 2
$DGP1[[1]][[3]]
$DGP1[[1]][[3]][[1]]
[1] 2
attr(,"params")
attr(,"params")$x
[1] 1
$DGP1[[2]]
$DGP1[[2]][[1]]
$DGP1[[2]][[1]][[1]]
[1] 3
$DGP1[[2]][[2]]
$DGP1[[2]][[2]][[1]]
[1] 3
$DGP1[[2]][[3]]
$DGP1[[2]][[3]][[1]]
[1] 3
attr(,"params")
attr(,"params")$x
[1] 2
$DGP2
$DGP2[[1]]
$DGP2[[1]][[1]]
$DGP2[[1]][[1]][[1]]
[1] 3
$DGP2[[1]][[2]]
$DGP2[[1]][[2]][[1]]
[1] 3
$DGP2[[1]][[3]]
$DGP2[[1]][[3]][[1]]
[1] 3
attr(,"params")
attr(,"params")$x
[1] 1
$DGP2[[2]]
$DGP2[[2]][[1]]
$DGP2[[2]][[1]][[1]]
[1] 4
$DGP2[[2]][[2]]
$DGP2[[2]][[2]][[1]]
[1] 4
$DGP2[[2]][[3]]
$DGP2[[2]][[3]][[1]]
[1] 4
attr(,"params")
attr(,"params")$x
[1] 2
$DGP2[[3]]
$DGP2[[3]][[1]]
$DGP2[[3]][[1]][[1]]
[1] 5
$DGP2[[3]][[2]]
$DGP2[[3]][[2]][[1]]
[1] 5
$DGP2[[3]][[3]]
$DGP2[[3]][[3]][[1]]
[1] 5
attr(,"params")
attr(,"params")$x
[1] 3
$DGP1
$DGP1[[1]]
$DGP1[[1]][[1]]
$DGP1[[1]][[1]][[1]]
[1] 2
attr(,"params")
attr(,"params")$x
[1] 1
attr(,"params")$y
[1] 1
$DGP1[[2]]
$DGP1[[2]][[1]]
$DGP1[[2]][[1]][[1]]
[1] 2
attr(,"params")
attr(,"params")$x
[1] 1
attr(,"params")$y
[1] 2
$DGP1[[3]]
$DGP1[[3]][[1]]
$DGP1[[3]][[1]][[1]]
[1] 3
attr(,"params")
attr(,"params")$x
[1] 2
attr(,"params")$y
[1] 1
$DGP1[[4]]
$DGP1[[4]][[1]]
$DGP1[[4]][[1]][[1]]
[1] 3
attr(,"params")
attr(,"params")$x
[1] 2
attr(,"params")$y
[1] 2
$DGP2
$DGP2[[1]]
$DGP2[[1]][[1]]
$DGP2[[1]][[1]][[1]]
[1] 3
attr(,"params")
attr(,"params")$x
[1] 1
$DGP2[[2]]
$DGP2[[2]][[1]]
$DGP2[[2]][[1]][[1]]
[1] 4
attr(,"params")
attr(,"params")$x
[1] 2
$DGP2[[3]]
$DGP2[[3]][[1]]
$DGP2[[3]][[1]][[1]]
[1] 5
attr(,"params")
attr(,"params")$x
[1] 3
$DGP1
$DGP1[[1]]
$DGP1[[1]][[1]]
$DGP1[[1]][[1]][[1]]
[1] 2
$DGP1[[1]][[2]]
$DGP1[[1]][[2]][[1]]
[1] 2
attr(,"params")
attr(,"params")$x
[1] 1
attr(,"params")$y
[1] 1
$DGP1[[2]]
$DGP1[[2]][[1]]
$DGP1[[2]][[1]][[1]]
[1] 2
$DGP1[[2]][[2]]
$DGP1[[2]][[2]][[1]]
[1] 2
attr(,"params")
attr(,"params")$x
[1] 1
attr(,"params")$y
[1] 2
$DGP1[[3]]
$DGP1[[3]][[1]]
$DGP1[[3]][[1]][[1]]
[1] 3
$DGP1[[3]][[2]]
$DGP1[[3]][[2]][[1]]
[1] 3
attr(,"params")
attr(,"params")$x
[1] 2
attr(,"params")$y
[1] 1
$DGP1[[4]]
$DGP1[[4]][[1]]
$DGP1[[4]][[1]][[1]]
[1] 3
$DGP1[[4]][[2]]
$DGP1[[4]][[2]][[1]]
[1] 3
attr(,"params")
attr(,"params")$x
[1] 2
attr(,"params")$y
[1] 2
$DGP2
$DGP2[[1]]
$DGP2[[1]][[1]]
$DGP2[[1]][[1]][[1]]
[1] 3
$DGP2[[1]][[2]]
$DGP2[[1]][[2]][[1]]
[1] 3
attr(,"params")
attr(,"params")$x
[1] 1
$DGP2[[2]]
$DGP2[[2]][[1]]
$DGP2[[2]][[1]][[1]]
[1] 4
$DGP2[[2]][[2]]
$DGP2[[2]][[2]][[1]]
[1] 4
attr(,"params")
attr(,"params")$x
[1] 2
$DGP2[[3]]
$DGP2[[3]][[1]]
$DGP2[[3]][[1]][[1]]
[1] 5
$DGP2[[3]][[2]]
$DGP2[[3]][[2]][[1]]
[1] 5
attr(,"params")
attr(,"params")$x
[1] 3
Fitting experiment works properly
# A tibble: 3 x 7
.rep .dgp_name .method_name scalar vector matrix tibble
<chr> <chr> <chr> <dbl> <list> <list> <list>
1 1 DGP2 Method2 5 <dbl [3]> <int [4 x 2]> <tibble [3 x 2]>
2 2 DGP2 Method2 5 <dbl [3]> <int [4 x 2]> <tibble [3 x 2]>
3 3 DGP2 Method2 5 <dbl [3]> <int [4 x 2]> <tibble [3 x 2]>
# A tibble: 12 x 8
.rep .dgp_name .method_name result1 scalar vector matrix tibble
<chr> <chr> <chr> <dbl> <dbl> <list> <list> <list>
1 1 DGP1 Method1 2 NA <NULL> <NULL> <NULL>
2 1 DGP1 Method2 NA 4 <NULL> <int [4 x 2]> <tibble>
3 1 DGP2 Method1 3 NA <NULL> <NULL> <NULL>
4 1 DGP2 Method2 NA 5 <dbl [3]> <int [4 x 2]> <tibble>
5 2 DGP1 Method1 2 NA <NULL> <NULL> <NULL>
6 2 DGP1 Method2 NA 4 <NULL> <int [4 x 2]> <tibble>
7 2 DGP2 Method1 3 NA <NULL> <NULL> <NULL>
8 2 DGP2 Method2 NA 5 <dbl [3]> <int [4 x 2]> <tibble>
9 3 DGP1 Method1 2 NA <NULL> <NULL> <NULL>
10 3 DGP1 Method2 NA 4 <NULL> <int [4 x 2]> <tibble>
11 3 DGP2 Method1 3 NA <NULL> <NULL> <NULL>
12 3 DGP2 Method2 NA 5 <dbl [3]> <int [4 x 2]> <tibble>
Printing Experiment works properly
Experiment Name: test-print
Saved results at: results/test-print
DGPs:
Methods:
Evaluators:
Visualizers:
Vary Across: None
Experiment Name: test-print
Saved results at: results/test-print
DGPs: DGP1, DGP2
Methods: Method1
Evaluators: Evaluator1, Evaluator2, Evaluator3
Visualizers:
Vary Across: None
Experiment Name: test-print
Saved results at: results/test-print
DGPs: DGP1, DGP2
Methods: Method1
Evaluators: Evaluator1, Evaluator2, Evaluator3
Visualizers: Visualizer1
Vary Across: None
Experiment Name: test-print
Saved results at: results/test-print
DGPs: DGP1, DGP2
Methods: Method1
Evaluators: Evaluator1, Evaluator2, Evaluator3
Visualizers: Visualizer1
Vary Across:
DGP: DGP1
x: int [1:3] 1 2 3
Experiment Name: test-print
Saved results at: results/test-print
DGPs: DGP1, DGP2
Methods: Method1
Evaluators: Evaluator1, Evaluator2, Evaluator3
Visualizers: Visualizer1
Vary Across:
Method: Method1
x: int [1:3] 1 2 3
Experiment Name: test-print
Saved results at: results/test-print
DGPs: DGP1, DGP2
Methods: Method1
Evaluators: Evaluator1, Evaluator2, Evaluator3
Visualizers: Visualizer1
Vary Across:
DGP: DGP1
x: int [1:3] 1 2 3
DGP: DGP2
x: int [1:3] 2 3 4
Method: Method1
x: int [1:3] 1 2 3
Experiment Name: test-print
Saved results at: results/test-print
DGPs: DGP1, DGP2
Methods: Method1
Evaluators: Evaluator1, Evaluator2, Evaluator3
Visualizers: Visualizer1
Vary Across:
DGP: DGP1
x: List of 1
$ : int [1:3] 1 2 3
DGP: DGP2
x: List of 1
$ : int [1:3] 2 3 4
Method: Method1
x: int [1:3] 1 2 3
Capturing errors, warnings, and messages from user-defined functions works as expected
Code
invisible(experiment$fit(n_reps = 2))
Message <simChef_message>
Fitting error-tracking...
Warning <simpleWarning>
rho must be greater than 0.5
Message <simpleMessage>
3 isn't in vec
3 isn't in vec
Warning <simpleWarning>
rho must be greater than 0.5
Message <simpleMessage>
3 isn't in vec
3 isn't in vec
Warning <simpleWarning>
rho must be greater than 0.5
Message <simpleMessage>
3 isn't in vec
3 isn't in vec
Warning <simpleWarning>
rho must be greater than 0.5
Message <simpleMessage>
3 isn't in vec
3 isn't in vec
3 isn't in vec
3 isn't in vec
3 isn't in vec
3 isn't in vec
Warning <simpleWarning>
rho must be greater than 0.5
Message <simpleMessage>
3 isn't in vec
3 isn't in vec
Warning <simpleWarning>
rho must be greater than 0.5
Message <simpleMessage>
3 isn't in vec
3 isn't in vec
Warning <simpleWarning>
rho must be greater than 0.5
Message <simpleMessage>
3 isn't in vec
3 isn't in vec
Warning <simpleWarning>
rho must be greater than 0.5
Message <simpleMessage>
3 isn't in vec
3 isn't in vec
3 isn't in vec
3 isn't in vec
3 isn't in vec
3 isn't in vec
Message <simChef_message>
2 reps completed (totals: 2/2) | time taken: _x_ minutes
==============================
Code
invisible(fit_results <- experiment$fit(n_reps = 2, verbose = 2))
Message <simChef_message>
Fitting error-tracking...
Warning <simChef_warning>
rho must be greater than 0.5
The above warning occurred while processing "dgp1" with the following params:
$ rho : num 0.2
$ noise_level: num 1
Warning <simpleWarning>
rho must be greater than 0.5
Message <simChef_message>
The message below occurred while processing "method_test" with the following params:
$ param2 : num 2
$ vec : int [1:4] 4 5 6 7
$ data_list:List of 1
..$ X:'data.frame': 1 obs. of 3 variables:
.. ..$ .n : num 10
.. ..$ .rho : num 0.2
.. ..$ .noise_level: num 1
$ .simplify: logi FALSE
Message <simpleMessage>
3 isn't in vec
Message <simChef_message>
The message below occurred while processing "method_test" with the following params:
$ param2 : num 4
$ vec : int [1:4] 4 5 6 7
$ data_list:List of 1
..$ X:'data.frame': 1 obs. of 3 variables:
.. ..$ .n : num 10
.. ..$ .rho : num 0.2
.. ..$ .noise_level: num 1
$ .simplify: logi FALSE
Message <simpleMessage>
3 isn't in vec
Warning <simChef_warning>
rho must be greater than 0.5
The above warning occurred while processing "dgp1" with the following params:
$ rho : num 0.2
$ noise_level: num 2
Warning <simpleWarning>
rho must be greater than 0.5
Message <simChef_message>
The message below occurred while processing "method_test" with the following params:
$ param2 : num 2
$ vec : int [1:4] 4 5 6 7
$ data_list:List of 1
..$ X:'data.frame': 1 obs. of 3 variables:
.. ..$ .n : num 10
.. ..$ .rho : num 0.2
.. ..$ .noise_level: num 2
$ .simplify: logi FALSE
Message <simpleMessage>
3 isn't in vec
Message <simChef_message>
The message below occurred while processing "method_test" with the following params:
$ param2 : num 4
$ vec : int [1:4] 4 5 6 7
$ data_list:List of 1
..$ X:'data.frame': 1 obs. of 3 variables:
.. ..$ .n : num 10
.. ..$ .rho : num 0.2
.. ..$ .noise_level: num 2
$ .simplify: logi FALSE
Message <simpleMessage>
3 isn't in vec
Warning <simChef_warning>
rho must be greater than 0.5
The above warning occurred while processing "dgp_test" with the following params:
$ rho : num 0.2
$ noise_level: num 1
Warning <simpleWarning>
rho must be greater than 0.5
Message <simChef_message>
The message below occurred while processing "method_test" with the following params:
$ param2 : num 2
$ vec : int [1:4] 4 5 6 7
$ data_list:List of 1
..$ X:'data.frame': 1 obs. of 3 variables:
.. ..$ .n : num 10
.. ..$ .rho : num 0.2
.. ..$ .noise_level: num 1
$ .simplify: logi FALSE
Message <simpleMessage>
3 isn't in vec
Message <simChef_message>
The message below occurred while processing "method_test" with the following params:
$ param2 : num 4
$ vec : int [1:4] 4 5 6 7
$ data_list:List of 1
..$ X:'data.frame': 1 obs. of 3 variables:
.. ..$ .n : num 10
.. ..$ .rho : num 0.2
.. ..$ .noise_level: num 1
$ .simplify: logi FALSE
Message <simpleMessage>
3 isn't in vec
Warning <simChef_warning>
rho must be greater than 0.5
The above warning occurred while processing "dgp_test" with the following params:
$ rho : num 0.2
$ noise_level: num 2
Warning <simpleWarning>
rho must be greater than 0.5
Message <simChef_message>
The message below occurred while processing "method_test" with the following params:
$ param2 : num 2
$ vec : int [1:4] 4 5 6 7
$ data_list:List of 1
..$ X:'data.frame': 1 obs. of 3 variables:
.. ..$ .n : num 10
.. ..$ .rho : num 0.2
.. ..$ .noise_level: num 2
$ .simplify: logi FALSE
Message <simpleMessage>
3 isn't in vec
Message <simChef_message>
The message below occurred while processing "method_test" with the following params:
$ param2 : num 4
$ vec : int [1:4] 4 5 6 7
$ data_list:List of 1
..$ X:'data.frame': 1 obs. of 3 variables:
.. ..$ .n : num 10
.. ..$ .rho : num 0.2
.. ..$ .noise_level: num 2
$ .simplify: logi FALSE
Message <simpleMessage>
3 isn't in vec
Message <simChef_message>
The message below occurred while processing "method_test" with the following params:
$ param2 : num 2
$ vec : int [1:4] 4 5 6 7
$ data_list:List of 1
..$ X:'data.frame': 1 obs. of 3 variables:
.. ..$ .n : num 10
.. ..$ .rho : num 0.9
.. ..$ .noise_level: num 1
$ .simplify: logi FALSE
Message <simpleMessage>
3 isn't in vec
Message <simChef_message>
The message below occurred while processing "method_test" with the following params:
$ param2 : num 4
$ vec : int [1:4] 4 5 6 7
$ data_list:List of 1
..$ X:'data.frame': 1 obs. of 3 variables:
.. ..$ .n : num 10
.. ..$ .rho : num 0.9
.. ..$ .noise_level: num 1
$ .simplify: logi FALSE
Message <simpleMessage>
3 isn't in vec
Message <simChef_message>
The message below occurred while processing "method_test" with the following params:
$ param2 : num 2
$ vec : int [1:4] 4 5 6 7
$ data_list:List of 1
..$ X:'data.frame': 1 obs. of 3 variables:
.. ..$ .n : num 10
.. ..$ .rho : num 0.9
.. ..$ .noise_level: num 2
$ .simplify: logi FALSE
Message <simpleMessage>
3 isn't in vec
Message <simChef_message>
The message below occurred while processing "method_test" with the following params:
$ param2 : num 4
$ vec : int [1:4] 4 5 6 7
$ data_list:List of 1
..$ X:'data.frame': 1 obs. of 3 variables:
.. ..$ .n : num 10
.. ..$ .rho : num 0.9
.. ..$ .noise_level: num 2
$ .simplify: logi FALSE
Message <simpleMessage>
3 isn't in vec
Warning <simChef_warning>
rho must be greater than 0.5
The above warning occurred while processing "dgp1" with the following params:
$ rho : num 0.2
$ noise_level: num 1
Warning <simpleWarning>
rho must be greater than 0.5
Message <simChef_message>
The message below occurred while processing "method_test" with the following params:
$ param2 : num 2
$ vec : int [1:4] 4 5 6 7
$ data_list:List of 1
..$ X:'data.frame': 1 obs. of 3 variables:
.. ..$ .n : num 10
.. ..$ .rho : num 0.2
.. ..$ .noise_level: num 1
$ .simplify: logi FALSE
Message <simpleMessage>
3 isn't in vec
Message <simChef_message>
The message below occurred while processing "method_test" with the following params:
$ param2 : num 4
$ vec : int [1:4] 4 5 6 7
$ data_list:List of 1
..$ X:'data.frame': 1 obs. of 3 variables:
.. ..$ .n : num 10
.. ..$ .rho : num 0.2
.. ..$ .noise_level: num 1
$ .simplify: logi FALSE
Message <simpleMessage>
3 isn't in vec
Warning <simChef_warning>
rho must be greater than 0.5
The above warning occurred while processing "dgp1" with the following params:
$ rho : num 0.2
$ noise_level: num 2
Warning <simpleWarning>
rho must be greater than 0.5
Message <simChef_message>
The message below occurred while processing "method_test" with the following params:
$ param2 : num 2
$ vec : int [1:4] 4 5 6 7
$ data_list:List of 1
..$ X:'data.frame': 1 obs. of 3 variables:
.. ..$ .n : num 10
.. ..$ .rho : num 0.2
.. ..$ .noise_level: num 2
$ .simplify: logi FALSE
Message <simpleMessage>
3 isn't in vec
Message <simChef_message>
The message below occurred while processing "method_test" with the following params:
$ param2 : num 4
$ vec : int [1:4] 4 5 6 7
$ data_list:List of 1
..$ X:'data.frame': 1 obs. of 3 variables:
.. ..$ .n : num 10
.. ..$ .rho : num 0.2
.. ..$ .noise_level: num 2
$ .simplify: logi FALSE
Message <simpleMessage>
3 isn't in vec
Warning <simChef_warning>
rho must be greater than 0.5
The above warning occurred while processing "dgp_test" with the following params:
$ rho : num 0.2
$ noise_level: num 1
Warning <simpleWarning>
rho must be greater than 0.5
Message <simChef_message>
The message below occurred while processing "method_test" with the following params:
$ param2 : num 2
$ vec : int [1:4] 4 5 6 7
$ data_list:List of 1
..$ X:'data.frame': 1 obs. of 3 variables:
.. ..$ .n : num 10
.. ..$ .rho : num 0.2
.. ..$ .noise_level: num 1
$ .simplify: logi FALSE
Message <simpleMessage>
3 isn't in vec
Message <simChef_message>
The message below occurred while processing "method_test" with the following params:
$ param2 : num 4
$ vec : int [1:4] 4 5 6 7
$ data_list:List of 1
..$ X:'data.frame': 1 obs. of 3 variables:
.. ..$ .n : num 10
.. ..$ .rho : num 0.2
.. ..$ .noise_level: num 1
$ .simplify: logi FALSE
Message <simpleMessage>
3 isn't in vec
Warning <simChef_warning>
rho must be greater than 0.5
The above warning occurred while processing "dgp_test" with the following params:
$ rho : num 0.2
$ noise_level: num 2
Warning <simpleWarning>
rho must be greater than 0.5
Message <simChef_message>
The message below occurred while processing "method_test" with the following params:
$ param2 : num 2
$ vec : int [1:4] 4 5 6 7
$ data_list:List of 1
..$ X:'data.frame': 1 obs. of 3 variables:
.. ..$ .n : num 10
.. ..$ .rho : num 0.2
.. ..$ .noise_level: num 2
$ .simplify: logi FALSE
Message <simpleMessage>
3 isn't in vec
Message <simChef_message>
The message below occurred while processing "method_test" with the following params:
$ param2 : num 4
$ vec : int [1:4] 4 5 6 7
$ data_list:List of 1
..$ X:'data.frame': 1 obs. of 3 variables:
.. ..$ .n : num 10
.. ..$ .rho : num 0.2
.. ..$ .noise_level: num 2
$ .simplify: logi FALSE
Message <simpleMessage>
3 isn't in vec
Message <simChef_message>
The message below occurred while processing "method_test" with the following params:
$ param2 : num 2
$ vec : int [1:4] 4 5 6 7
$ data_list:List of 1
..$ X:'data.frame': 1 obs. of 3 variables:
.. ..$ .n : num 10
.. ..$ .rho : num 0.9
.. ..$ .noise_level: num 1
$ .simplify: logi FALSE
Message <simpleMessage>
3 isn't in vec
Message <simChef_message>
The message below occurred while processing "method_test" with the following params:
$ param2 : num 4
$ vec : int [1:4] 4 5 6 7
$ data_list:List of 1
..$ X:'data.frame': 1 obs. of 3 variables:
.. ..$ .n : num 10
.. ..$ .rho : num 0.9
.. ..$ .noise_level: num 1
$ .simplify: logi FALSE
Message <simpleMessage>
3 isn't in vec
Message <simChef_message>
The message below occurred while processing "method_test" with the following params:
$ param2 : num 2
$ vec : int [1:4] 4 5 6 7
$ data_list:List of 1
..$ X:'data.frame': 1 obs. of 3 variables:
.. ..$ .n : num 10
.. ..$ .rho : num 0.9
.. ..$ .noise_level: num 2
$ .simplify: logi FALSE
Message <simpleMessage>
3 isn't in vec
Message <simChef_message>
The message below occurred while processing "method_test" with the following params:
$ param2 : num 4
$ vec : int [1:4] 4 5 6 7
$ data_list:List of 1
..$ X:'data.frame': 1 obs. of 3 variables:
.. ..$ .n : num 10
.. ..$ .rho : num 0.9
.. ..$ .noise_level: num 2
$ .simplify: logi FALSE
Message <simpleMessage>
3 isn't in vec
Message <simChef_message>
2 reps completed (totals: 2/2) | time taken: _x_ minutes
==============================
Code
invisible(experiment$evaluate(fit_results))
Message <simChef_message>
Evaluating error-tracking...
Warning <simpleWarning>
that's a lot of rows
Message <simChef_message>
Evaluation completed | time taken: _x_ minutes
==============================
Code
invisible(eval_results <- experiment$evaluate(fit_results, verbose = 2))
Message <simChef_message>
Evaluating error-tracking...
Warning <simChef_warning>
that's a lot of rows
The above warning occurred while processing "evaluator1" with the following params:
$ fit_results: tibble [48 x 10] (S3: tbl_df/tbl/data.frame)
..$ .rep : chr [1:48] "1" "1" "1" "1" ...
..$ .dgp_name : chr [1:48] "dgp1" "dgp1" "dgp1" "dgp1" ...
..$ .method_name: chr [1:48] "method_test" "method_test" "method_test" "method_test" ...
..$ rho : num [1:48] 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.2 ...
..$ noise_level : num [1:48] 1 1 1 1 2 2 2 2 1 1 ...
..$ param2 : num [1:48] 2 2 4 4 2 2 4 4 2 2 ...
..$ vec :List of 48
..$ .n : num [1:48] 10 10 10 10 10 10 10 10 10 10 ...
..$ .rho : num [1:48] 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.2 ...
..$ .noise_level: num [1:48] 1 1 1 1 2 2 2 2 1 1 ...
$ vary_params: chr [1:6] "rho" "noise_level" "rho" "noise_level" ...
Warning <simpleWarning>
that's a lot of rows
Message <simChef_message>
Evaluation completed | time taken: _x_ minutes
==============================
Code
invisible(experiment$visualize(fit_results, eval_results))
Message <simChef_message>
Visualizing error-tracking...
Warning <simpleWarning>
False alarm!
Message <simChef_message>
Visualization completed | time taken: _x_ minutes
==============================
Code
invisible(viz_results <- experiment$visualize(fit_results, eval_results,
verbose = 2))
Message <simChef_message>
Visualizing error-tracking...
Warning <simChef_warning>
False alarm!
The above warning occurred while processing "visualizer1" with the following params:
$ fit_results : tibble [48 x 10] (S3: tbl_df/tbl/data.frame)
..$ .rep : chr [1:48] "1" "1" "1" "1" ...
..$ .dgp_name : chr [1:48] "dgp1" "dgp1" "dgp1" "dgp1" ...
..$ .method_name: chr [1:48] "method_test" "method_test" "method_test" "method_test" ...
..$ rho : num [1:48] 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.2 ...
..$ noise_level : num [1:48] 1 1 1 1 2 2 2 2 1 1 ...
..$ param2 : num [1:48] 2 2 4 4 2 2 4 4 2 2 ...
..$ vec :List of 48
..$ .n : num [1:48] 10 10 10 10 10 10 10 10 10 10 ...
..$ .rho : num [1:48] 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.2 ...
..$ .noise_level: num [1:48] 1 1 1 1 2 2 2 2 1 1 ...
$ eval_results:List of 1
..$ evaluator1: tibble [1 x 10] (S3: tbl_df/tbl/data.frame)
$ vary_params : chr [1:6] "rho" "noise_level" "rho" "noise_level" ...
Warning <simpleWarning>
False alarm!
Message <simChef_message>
Visualization completed | time taken: _x_ minutes
==============================
Code
invisible(experiment$visualize(fit_results, eval_results, verbose = 2))
Message <simChef_message>
Visualizing error-tracking...
Warning <simChef_warning>
False alarm!
The above warning occurred while processing "visualizer1" with the following params:
$ fit_results : tibble [48 x 10] (S3: tbl_df/tbl/data.frame)
..$ .rep : chr [1:48] "1" "1" "1" "1" ...
..$ .dgp_name : chr [1:48] "dgp1" "dgp1" "dgp1" "dgp1" ...
..$ .method_name: chr [1:48] "method_test" "method_test" "method_test" "method_test" ...
..$ rho : num [1:48] 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.2 ...
..$ noise_level : num [1:48] 1 1 1 1 2 2 2 2 1 1 ...
..$ param2 : num [1:48] 2 2 4 4 2 2 4 4 2 2 ...
..$ vec :List of 48
..$ .n : num [1:48] 10 10 10 10 10 10 10 10 10 10 ...
..$ .rho : num [1:48] 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.2 ...
..$ .noise_level: num [1:48] 1 1 1 1 2 2 2 2 1 1 ...
$ eval_results:List of 1
..$ evaluator1: tibble [1 x 10] (S3: tbl_df/tbl/data.frame)
$ vary_params : chr [1:6] "rho" "noise_level" "rho" "noise_level" ...
Warning <simpleWarning>
False alarm!
Error <rlang_error>
i In index: 2.
Caused by error in `.f()`:
! Oh no!
The above error occurred while processing "visualizer2" with the following params:
$ fit_results : tibble [48 x 10] (S3: tbl_df/tbl/data.frame)
..$ .rep : chr [1:48] "1" "1" "1" "1" ...
..$ .dgp_name : chr [1:48] "dgp1" "dgp1" "dgp1" "dgp1" ...
..$ .method_name: chr [1:48] "method_test" "method_test" "method_test" "method_test" ...
..$ rho : num [1:48] 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.2 ...
..$ noise_level : num [1:48] 1 1 1 1 2 2 2 2 1 1 ...
..$ param2 : num [1:48] 2 2 4 4 2 2 4 4 2 2 ...
..$ vec :List of 48
..$ .n : num [1:48] 10 10 10 10 10 10 10 10 10 10 ...
..$ .rho : num [1:48] 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.2 0.2 ...
..$ .noise_level: num [1:48] 1 1 1 1 2 2 2 2 1 1 ...
$ eval_results:List of 1
..$ evaluator1: tibble [1 x 10] (S3: tbl_df/tbl/data.frame)
$ vary_params : chr [1:6] "rho" "noise_level" "rho" "noise_level" ...
Caused by error:
! Oh no!
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