AnalyzeInterInAction: Analysis Composition of Actions

In ZJUDBlab/InterCellDB: Tool and Database for Analyzing Interactions

Analysis Composition of Actions

Description

This function gets to group gene pairs by their expression change, action mode and action effect.

Usage

AnalyzeInterInAction(
  object,
  limits.exprs.change = kexprs.change,
  limits.action.mode = kpred.action.mode,
  limits.action.effect = kpred.action.effect
)

Arguments

object	A InterCell object, which is created by CreateInterCellObject.
limits.exprs.change	Options are 'Xup.Yup', 'Xup.Ydn', 'Xdn.Yup', 'Xdn.Ydn'. It collects the gene pairs matching to given expression change.
limits.action.mode	Options are listed in kpred.action.mode. It specifies the range of used action mode.
limits.action.effect	Options are listed in kpred.action.effect. It specifies the range of used action effect.

Value

A InterCell object.

ZJUDBlab/InterCellDB documentation built on March 19, 2023, 4:56 p.m.