API for ZJUDBlab/InterCellDB
Tool and Database for Analyzing Interactions

Global functions
AnalyzeInterInAction	Man page Source code
AnalyzeInterInFullView	Man page Source code
AnalyzeInterSpecificity	Man page Source code
CheckParamStd	Source code
CheckSpeciesValidity	Man page Source code
CreateDBPackObject	Man page Source code
CreateInterCellObject	Man page Source code
DataPrep.AddExprs	Man page Source code
DataPrep.GenStdGenePairs.from.VEinfos	Man page Source code
DataPrep.RemapClustersMarkers	Man page Source code
DoPartUnique	Man page Source code
ExtractTargetOnepairClusters	Man page Source code
FastAlignPairs	Man page Source code
FetchGeneOI	Man page
FetchGeneOI,InterCell-method	Man page
FetchGeneOI,InterCellDBPack-method	Man page
FetchGeneOI.default	Man page Source code
FetchInterOI	Man page Source code
FormatCustomGenePairs	Man page Source code
GenerateMapDetailOnepairClusters	Man page Source code
GenerateVEinfos	Man page Source code
GetOneInter	Man page Source code
GetResultFullView	Man page Source code
GetResultPieActionEffect	Man page Source code
GetResultPieActionMode	Man page Source code
GetResultTgCellPlot	Man page Source code
GetResultTgCrosstalk	Man page Source code
GetResultTgSpecificity	Man page Source code
Inside.CollectActionMapping	Source code
Inside.DummyActionsRefDB	Man page Source code
Inside.DummyFgenes	Man page Source code
Inside.DummyGORefDB	Man page Source code
Inside.DummyGenesRefDB	Man page Source code
Inside.GetCoords.PartialCircle	Source code
Inside.GetCoords.ZeroCircle	Source code
Inside.TransCoords.Enlarge.Rotate	Source code
Inside.sel.gene.pairs.method.power.default	Source code
Inside.sel.gene.pairs.method.random.default	Source code
InsideObjectDBPack	Man page Source code
InsideObjectInterCell	Man page Source code
InsideParam.species	Man page Source code
InterCell	Man page
InterCell-class	Man page
InterCellDBPack	Man page
InterCellDBPack-class	Man page
ListAllClusters	Man page Source code
ListAllGeneGOTerm	Man page
ListAllGeneGOTerm,InterCell-method	Man page
ListAllGeneGOTerm,InterCellDBPack-method	Man page
ListAllGeneGOTerm.default	Man page Source code
ListAllGeneLocation	Man page
ListAllGeneLocation,InterCell-method	Man page
ListAllGeneLocation,InterCellDBPack-method	Man page
ListAllGeneLocation.default	Man page Source code
ListAllGeneMergeType	Man page
ListAllGeneMergeType,InterCell-method	Man page
ListAllGeneMergeType,InterCellDBPack-method	Man page
ListAllGeneMergeType.default	Man page Source code
ListAllGeneType	Man page
ListAllGeneType,InterCell-method	Man page
ListAllGeneType,InterCellDBPack-method	Man page
ListAllGeneType.default	Man page Source code
ListClusterGroups	Man page Source code
ListGeneSelectionProperty	Man page
MergeDBSubset	Man page Source code
MergeGeneOI	Man page Source code
ReplaceClusterName	Man page Source code
ReverseOddEvenCols	Man page Source code
ScatterRing.Plot	Source code
ScatterSimple.Plot	Source code
SelectDBSubset	Man page
SelectDBSubset,InterCell-method	Man page
SelectDBSubset,InterCellDBPack-method	Man page
SelectDBSubset.default	Man page Source code
SelectInterSubset	Man page Source code
Tc.Cap.simple	Source code
Tc.Cap.simple.vec	Source code
TgView.formula.onExprs.default	Source code
TgView.formula.onLogFC.default	Man page Source code
TgView.formula.onPVal.default	Man page Source code
Tool.FindGenesFromGO	Man page Source code
Tool.GenPermutation	Man page Source code
Tool.ShowGraph	Man page Source code
Tool.SplitToGenDataFrame	Man page Source code
Tool.WriteTables	Man page Source code
TransActionEffectToActId	Source code
Uniprot.key.map.list	Man page
actions.human.ref.db	Man page
actions.mouse.ref.db	Man page
anno.location.human.ref.db	Man page
anno.location.mouse.ref.db	Man page
anno.type.human.ref.db	Man page
anno.type.mouse.ref.db	Man page
genes.human.ref.db	Man page
genes.mouse.ref.db	Man page
getClusterSplit	Man page
getClusterSplit,InterCell-method	Man page
getFullViewResult	Man page
getFullViewResult,InterCell-method	Man page
getGenePairSplit	Man page
getGenePairSplit,InterCell-method	Man page
getOrigClusterNameTgVEInfo	Source code
getRefDatabase	Man page
getRefDatabase,InterCell-method	Man page
getTgActionComp	Man page
getTgActionComp,InterCell-method	Man page
getTgActionPairs	Man page
getTgActionPairs,InterCell-method	Man page
getTgItInfo	Man page
getTgItInfo,InterCell-method	Man page
getTgSpGenes	Man page
getTgSpGenes,InterCell-method	Man page
getTgVEInfo	Man page
getTgVEInfo,InterCell-method	Man page
go.human.ref.db	Man page
go.mouse.ref.db	Man page
kexprs.change	Man page
kmusthave.colnames	Man page
kpred.action.effect	Man page
kpred.action.mode	Man page
kpred.color.effect	Man page
kpred.color.ext.effect	Man page
kpred.color.mode	Man page
kpred.ext.action.effect	Man page
pairs.human.db	Man page
pairs.mouse.db	Man page
setClusterSplit	Man page
setClusterSplit,InterCell-method	Man page
setFullViewResult	Man page
setFullViewResult,InterCell-method	Man page
setGenePairSplit	Man page
setGenePairSplit,InterCell-method	Man page
setRefDatabase	Man page
setRefDatabase,InterCell-method	Man page
setTgActionComp	Man page
setTgActionComp,InterCell-method	Man page
setTgActionPairs	Man page
setTgActionPairs,InterCell-method	Man page
setTgItInfo	Man page
setTgItInfo,InterCell-method	Man page
setTgSpGenes	Man page
setTgSpGenes,InterCell-method	Man page
setTgVEInfo	Man page
setTgVEInfo,InterCell-method	Man page
validInterCellDBPackObject	Source code
validInterCellObject	Source code