ListGeneSelectionProperty: List Options for Gene Selection

In ZJUDBlab/InterCellDB: Tool and Database for Analyzing Interactions

List Options for Gene Selection

Description

This group of functions are served for giving options on selecting gene subset. It ranges from subcellular locations, molecular functions and GO terms.

Usage

ListAllGeneLocation(object, ...)

ListAllGeneType(object, ...)

ListAllGeneMergeType(object, ...)

ListAllGeneGOTerm(object, ...)

ListAllGeneLocation.default(object)

## S4 method for signature 'InterCellDBPack'
ListAllGeneLocation(object, ...)

## S4 method for signature 'InterCell'
ListAllGeneLocation(object, ...)

ListAllGeneType.default(object)

## S4 method for signature 'InterCellDBPack'
ListAllGeneType(object, ...)

## S4 method for signature 'InterCell'
ListAllGeneType(object, ...)

ListAllGeneMergeType.default(object)

## S4 method for signature 'InterCellDBPack'
ListAllGeneMergeType(object, ...)

## S4 method for signature 'InterCell'
ListAllGeneMergeType(object, ...)

ListAllGeneGOTerm.default(object, n.output = +Inf)

## S4 method for signature 'InterCellDBPack'
ListAllGeneGOTerm(object, ...)

## S4 method for signature 'InterCell'
ListAllGeneGOTerm(object, ...)

Arguments

object	Allowed object should be in either class InterCell or class InterCellDBPack.
...	Parameters passed to corresponding function with suffix 'default', like use ListAllGeneLocation and check parameters in ListAllGeneLocation.default.
n.output	It gives the first N GO terms in the order of AlphaBet.

Value

Character. The options.

ZJUDBlab/InterCellDB documentation built on March 19, 2023, 4:56 p.m.