TgView.formula.onPVal.default: Formula on Confidence for One Gene Pair
In ZJUDBlab/InterCellDB: Tool and Database for Analyzing Interactions

TgView.formula.onPVal.default

R Documentation

Formula on Confidence for One Gene Pair

Description

This is the default formula on calculating confidence for every gene pair, and the multiplying value of PVal for gene partners will be regarded as confidence.

Usage

TgView.formula.onPVal.default(data.f, data.b, pval.log.max = 300)

Arguments

`data.f`	vector. The PVal values for one list of gene partners. PVal values are specified when creating `InterCell` object.
`data.b`	vector. The PVal values for another list of gene partners, which is one-by-one matched to those in parameter `data.f`.
`pval.log.max`	The number for replacing the infinite number when `log(PVal = 0)`.