plot_lr_path: Plot LR and downstream pathways

In ZJUFanLab/SpaTalk: Infer Cell-Cell Communication for Spatial Transcriptomics

Plot LR and downstream pathways

Description

Plot network with LR and downstream pathways

Usage

plot_lr_path(
  object,
  celltype_sender,
  celltype_receiver,
  ligand,
  receptor,
  color = NULL,
  size = 5,
  arrow_length = 0.1
)

Arguments

object	SpaTalk object generated from dec_cci.
celltype_sender	Name of celltype_sender.
celltype_receiver	Name of celltype_receiver.
ligand	Name of ligand from celltype_sender.
receptor	Name of receptor from celltype_receiver.
color	Color for points Two values.
size	Size of points.
arrow_length	Arrow length.

ZJUFanLab/SpaTalk documentation built on Jan. 21, 2025, 3:13 p.m.