plot_st_celltype_percent: Plot spatial distribution of a single cell type percent

In ZJUFanLab/SpaTalk: Infer Cell-Cell Communication for Spatial Transcriptomics

Plot spatial distribution of a single cell type percent

Description

Plot spatial distribution of a single predicted cell type percent for transcriptomics data

Usage

plot_st_celltype_percent(
  object,
  celltype,
  size = 1,
  color_low = NULL,
  color_mid = NULL,
  color_high = NULL,
  color_midpoint = NULL
)

Arguments

object	SpaTalk object generated from dec_celltype.
celltype	Name of cell type in the sc_celltype.
size	Point size. Default is 1.
color_low	Color for the lowest value.
color_mid	Color for the middle value for using scale_color_gradient2. Default is NULL.
color_high	Color for the highest value.
color_midpoint	Value for the middle scale. Default is NULL.

ZJUFanLab/SpaTalk documentation built on Jan. 21, 2025, 3:13 p.m.