plot_st_celltype: Plot spatial distribution of a single cell type
In ZJUFanLab/SpaTalk: Infer Cell-Cell Communication for Spatial Transcriptomics
plot_st_celltype R Documentation
Plot spatial distribution of a single cell type
Description
Ponit plot with spatial distribution of a single predicted cell type for transcriptomics data
Usage
plot_st_celltype(
object,
celltype,
size = 1,
color_celltype = "blue",
color_others = "grey"
)
Arguments
object
SpaTalk object generated from dec_celltype.
celltype
Name of cell type in the sc_celltype.
size
Point size. Default is 1.
color_celltype
Color for the celltype of interest.
color_others
Color for the others.
ZJUFanLab/SpaTalk documentation built on Jan. 21, 2025, 3:13 p.m.
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| plot_st_celltype | R Documentation |
Plot spatial distribution of a single cell type
Description
Ponit plot with spatial distribution of a single predicted cell type for transcriptomics data
Usage
plot_st_celltype(
object,
celltype,
size = 1,
color_celltype = "blue",
color_others = "grey"
)
Arguments
object |
SpaTalk object generated from |
celltype |
Name of cell type in the |
size |
Point size. Default is |
color_celltype |
Color for the celltype of interest. |
color_others |
Color for the others. |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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