classify_sequences: Given a set of sequences containing mutations and identical...
In abelew/Rerrrt: Examine RT error rates through sequencing.

The reads_per_index_summary provides a table of the number of mutant and identical reads associated with every index in the data. Identical reads are (obviously) ones with 0 mutations. Sequencer index/reads are when there is 1 mutant out of n reads for an index. RT index/reads are when all reads for an index are mutant.

classify_sequences(
  chng,
  ident,
  reads_per_index_summary,
  min_sequencer = 10,
  verbose = verbose
)

`chng`	Set of reads with mutants.
`ident`	Set of reads which are identical.
`reads_per_index_summary`	Table containing how many reads/index are identical/mutant.
`min_sequencer`	Define how stringent one must be to deem a given read/index group as a sequencer-based error. Too small and gets too many false positives, too large and one gets insufficient data to play with.
`verbose`	Print some information while running.