Description Usage Arguments Value
A subset of the reads have a weirdly large number of differences to the template. These add confusing noise to the data, however removing them may take away meaningful noise from the data. So this function may prove to be awesome or terrible, depending on one's perspective.
1 2 3 4 5 6 | filter_max_mutations(
chng,
mutation_df,
max_mutations_per_read = 10,
verbose = FALSE
)
|
chng |
Data set of reads which are not identical to the template. |
mutation_df |
Data frame of readids and their number of mutations. |
max_mutations_per_read |
What it says on the tin. |
verbose |
Print some information while running? |
The remaining reads and a little summary information.
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