write_matrices: Make a pretty xlsx file of the various summary statistics and...

Description Usage Arguments

View source: R/write_matrices.r

Description

This takes the results of create_matrices() and hopefully prints some pretty data about them.

Usage

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write_matrices(
  retlst,
  excel,
  min_reads = NULL,
  min_indexes = NULL,
  min_sequencer = 10,
  min_position = NULL,
  max_position = NULL,
  max_mutations_per_read = NULL,
  prune_n = TRUE,
  verbose = FALSE
)

Arguments

retlst

Result from create_matrices()

excel

Excel filename.

min_reads

Written to a summary table.

min_indexes

Written to a summary table.

min_sequencer

Written to a summary table.

min_position

Written to a summary table.

max_position

Written to a summary table.

max_mutations_per_read

Written to a summary table.

prune_n

Written to a summary table.

verbose

Print!


abelew/Rerrrt documentation built on Jan. 15, 2022, 8 a.m.