inst/examples/example_reRank.R
In aertslab/RcisTarget: RcisTarget Identify transcription factor binding motifs enriched on a list of genes or genomic regions
library(RcisTarget.hg19.motifDBs.cisbpOnly.500bp)
data(hg19_500bpUpstream_motifRanking_cispbOnly)
motifRankings <- hg19_500bpUpstream_motifRanking_cispbOnly
genes <- colnames(getRanking(motifRankings))[10:20]
reRank(motifRankings, columns=genes)
aertslab/RcisTarget documentation built on March 7, 2024, 11:21 p.m.
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library(RcisTarget.hg19.motifDBs.cisbpOnly.500bp)
data(hg19_500bpUpstream_motifRanking_cispbOnly)
motifRankings <- hg19_500bpUpstream_motifRanking_cispbOnly
genes <- colnames(getRanking(motifRankings))[10:20]
reRank(motifRankings, columns=genes)
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Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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