API for aertslab/ScoMAP
ScoMAP: Single-Cell Omics Mapping into spatial Axes using Pseudotemporal ordering
| Global functions | |
|---|---|
| .distinctColorPalette | Source code |
| .getOverlapRegionsFromGR_regions | Source code |
| .map2color | Source code |
| .mapCells_int | Source code |
| .readTemplateSection | Source code |
| .regionVectorToGenomicRanges | Source code |
| PlotVMFeatures | Man page |
| VM_loom | Man page Source code |
| addClusterAnnotation | Man page Source code |
| addExternalCluster | Man page Source code |
| enhancerToGene | Man page Source code |
| exportBB | Man page Source code |
| getSearchSpace | Man page Source code |
| getVirtualFeatureMatrix | Man page Source code |
| intercalateCells | Man page Source code |
| mapCells | Man page Source code |
| plotAnnotatedVM | Man page Source code |
| plotLinks | Man page Source code |
| plotVMFeatures | Man page Source code |
| pruneLinks | Man page Source code |
| readTemplate | Man page Source code |
| readTemplateBySection | Man page Source code |
| readTemplateFromLoom | Man page Source code |
| selectLandmark | Man page Source code |
