addExternalCluster: addExternalCluster

In aertslab/ScoMAP: ScoMAP: Single-Cell Omics Mapping into spatial Axes using Pseudotemporal ordering

Description

Plots VM based on cluster annotation

Usage

addExternalCluster(VM, x, y, number_cells = 40, color, cluster_annot)

Arguments

VM	Virtual map data frame
x	X position to draw external cluster
y	Y position to draw external cluster
color	Color given to the new external cluster
cluster_annot	Annotation of the new external cluster
number_cell	Minimal number of cells that the external cluster should have. Default:40

Value

A virtual map data.frame containing additional rows with the new cluster information

Examples

VM <- addExternalCluster(VM, x=x, y=y, number_cells=40, color='black', 'Cluster_X')

aertslab/ScoMAP documentation built on Oct. 8, 2021, 1:15 a.m.