plotAnnotatedVM: plotAnnotatedVM
In aertslab/ScoMAP: ScoMAP: Single-Cell Omics Mapping into spatial Axes using Pseudotemporal ordering
Description
Usage
Arguments
Examples
Description
Plots VM based on cluster annotation
Usage
1
plotAnnotatedVM(VM, colVar = NULL, inset = c(-0.2, 0), show.landmark = FALSE)
Arguments
VM
Virtual map data frame
inset
Indicates the positon out of the plot the legend will be. Default: c(-0.2,0)
show.landmark
Show landmark cells in red. Default: FALSE.
colVars
Vector with selected colors and cluster annotation as names. Default=NULL.
Examples
1
VM <- plotAnnotatedVM(VM, clusterAnnotation)
aertslab/ScoMAP documentation built on Oct. 8, 2021, 1:15 a.m.
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Description Usage Arguments Examples
Description
Plots VM based on cluster annotation
Usage
1 | plotAnnotatedVM(VM, colVar = NULL, inset = c(-0.2, 0), show.landmark = FALSE)
|
Arguments
VM |
Virtual map data frame |
inset |
Indicates the positon out of the plot the legend will be. Default: c(-0.2,0) |
show.landmark |
Show landmark cells in red. Default: FALSE. |
colVars |
Vector with selected colors and cluster annotation as names. Default=NULL. |
Examples
1 | VM <- plotAnnotatedVM(VM, clusterAnnotation)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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