arseq.kmeans.plot: K Means clustering Heatmap

In ajitjohnson/arseq: Automated RNA Sequencing Analysis Pipeline

Description

Heatmap of the Most Variable genes divided into clusters

Usage

arseq.kmeans.plot(
  data,
  clusters,
  metadata,
  intgroup = "arseq.group",
  save.plot = FALSE,
  save.dir = getwd()
)

Arguments

data	Normalized expression dataframe
clusters	List of gene clusters returned by Kmeans clustering algorithm

Value

Heatmap

Examples

arseq.kmeans.plot (data,clusters=kmeansclusters,metadata= example_meta,intgroup="treatment")

ajitjohnson/arseq documentation built on Oct. 28, 2021, 3:53 a.m.