arseq.mvg: Most Variable Genes
In ajitjohnson/arseq: Automated RNA Sequencing Analysis Pipeline
Description
Usage
Arguments
Value
Examples
Description
Identifying the most variable genes in the dataset
Usage
1
Arguments
data
DESeq2 object or normalized expression dataframe
variable.genes
numeric: The number of most variable genes to be identified. By default, the program identifies the top 1000 most variable genes.
dds.object
Logical parameter indicating if the data is a DESeq2 object. Default=TRUE
Value
The most variable genes
Examples
1
mvg <- arseq.mvg (example_dds)
ajitjohnson/arseq documentation built on Oct. 28, 2021, 3:53 a.m.
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Description Usage Arguments Value Examples
Description
Identifying the most variable genes in the dataset
Usage
1 |
Arguments
data |
DESeq2 object or normalized expression dataframe |
variable.genes |
numeric: The number of most variable genes to be identified. By default, the program identifies the top 1000 most variable genes. |
dds.object |
Logical parameter indicating if the data is a DESeq2 object. Default=TRUE |
Value
The most variable genes
Examples
1 | mvg <- arseq.mvg (example_dds)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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