aksenia/SeeCiTe: Assess the quality of and visualize array CNV callset for trios

False Positives and low quality CNV calls plague many of the array-based datasets. Using the raw signal data and a CNV call file (made with PennCNV trio), this package assesses the quality of calls made. In addition it allows to visualize calls in an informed way.

Getting started

Package details

AuthorKsenia Lavrichenko [aut, cre]
MaintainerKsenia Lavrichenko <ksenia.lavrichenko@gmail.com>
LicenseMIT + file LICENSE
Version0.0.1
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("aksenia/SeeCiTe")
aksenia/SeeCiTe documentation built on Jan. 19, 2021, 12:35 a.m.