classifySingles: Main function that uses prepared summary statistics to...
In aksenia/SeeCiTe: Assess the quality of and visualize array CNV callset for trios
Description
Usage
Arguments
Value
View source: R/classifySingles.R
Description
Main function that uses prepared summary statistics to classify CNVs into categories
Usage
1
classifySingles(analyzed_df, lrr_flank_pass = 0.3)
Arguments
analyzed_df
Output of runAnalyzeSignal for a single sample mode
lrr_flank_pass
A cutoff on the LRR_SD in flanking region, default 0.3 in single mode
Value
A data table with most useful statistics and classification results per individual per CNV
aksenia/SeeCiTe documentation built on Jan. 19, 2021, 12:35 a.m.
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Description Usage Arguments Value
View source: R/classifySingles.R
Description
Main function that uses prepared summary statistics to classify CNVs into categories
Usage
1 | classifySingles(analyzed_df, lrr_flank_pass = 0.3)
|
Arguments
analyzed_df |
Output of runAnalyzeSignal for a single sample mode |
lrr_flank_pass |
A cutoff on the LRR_SD in flanking region, default 0.3 in single mode |
Value
A data table with most useful statistics and classification results per individual per CNV
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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