get.synapses: Get 3D coordinates of synapse (not connector) positions

In alexanderbates/catnat: Analyse neuronal morphology and connectivity (extends catmaid and nat)

Get 3D coordinates of synapse (not connector) positions

Description

Get 3D coordinates of synapse (not connector) positions

Usage

get.synapses(x, target = c("BOTH", "PRE", "POST"), polypre = T, ...)

## S3 method for class 'neuron'
get.synapses(x, target = c("BOTH", "PRE", "POST"), polypre = T, ...)

## S3 method for class 'neuronlist'
get.synapses(x, target = c("BOTH", "PRE", "POST"), polypre = T, ...)

Arguments

x	a neuronlist or neuron object
target	whether post or presynapse are ot be returned, or both
polypre	whether to consider the number of presynapses as a multiple of the numbers of connections each makes
...	additional arguments passed to methods.

Value

Anatomically accurate synapse position (i.e. not just connector positions) as 3D coordinates

See Also

clusterbysynapses flow.centrality

alexanderbates/catnat documentation built on Sept. 5, 2023, 4:51 a.m.