label_neuron.class: See neurons with chosen neuropils to determine their types

In alexanderbates/catnat: Analyse neuronal morphology and connectivity (extends catmaid and nat)

See neurons with chosen neuropils to determine their types

Description

Cycle through neurons, plotting them and chosen neuropils, and choose a 'type'

Usage

label_neuron.class(
  x,
  plotting.brain = nat.flybrains::FCWB,
  regionalised.brain = nat.flybrains::FCWBNP.surf,
  neuropils = "LH",
  ...
)

Arguments

x	a neuronlist object, with neurons split into axon and dendrite
plotting.brain	brain to plot
regionalised.brain	Standard deviation to use in distance dependence of nblast v1 algorithm. Ignored when version=2
neuropils	neuropils to plot
...	additional arguments passed to methods

Value

a label_neuron.class

alexanderbates/catnat documentation built on Sept. 5, 2023, 4:51 a.m.