make.mirror.transform: Get the transformation matrix from the Morpho::mirror...

In alexanderbates/catnat: Analyse neuronal morphology and connectivity (extends catmaid and nat)

Get the transformation matrix from the Morpho::mirror function

Description

Get the transformation matrix from the Morpho::mirror function

Usage

make.mirror.transform(
  x,
  icpiter = 50,
  subsample = NULL,
  pcAlign = FALSE,
  mirroraxis = 1,
  initPC = TRUE,
  initCenter = TRUE,
  mc.cores = 2
)

Arguments

x	k x 3 matrix or mesh3d
icpiter	Number of iterations to run
subsample	integer: use only a subset for icp matching
pcAlign	if TRUE, the icp will be preceded by an alignment of the principal axis (only used if icpiter > 0), currently only works for 3D data
mirroraxis	integer: which axis to mirror at
initPC	logical: if TRUE the data will be prealigned by its principal axes
initCenter	logical: if TRUE and initPC=FALSE, x will be translated to its centroid before mirroring
mc.cores	use parallel processing to find best alignment to original shape
...	additional arguments passed to methods

alexanderbates/catnat documentation built on Sept. 5, 2023, 4:51 a.m.