mark.microtubules | R Documentation |
Manually assign the dendrite and axon to neurons / a neuron
mark.microtubules(x, ...)
## S3 method for class 'neuron'
mark.microtubules(x, ...)
## S3 method for class 'neuronlist'
mark.microtubules(x, ...)
prune_microtubules(x, ...)
## S3 method for class 'neuron'
prune_microtubules(x, microtubules = TRUE, ...)
## S3 method for class 'neuronlist'
prune_microtubules(x, microtubules = TRUE, ...)
visualise.microtubules(x, soma = TRUE, WithConnectors = FALSE, ...)
microtubules.errors(skid)
x |
a neuron/neuronlist object |
... |
Additional arguments passed to nlapply |
microtubules |
whether to return the microtubule containing arbour (TRUE) or twigs (FALSE) |
soma |
for |
WithConnectors |
for |
skid |
skeleton ID of CATMAID neuron for checking whether there are presynapses marked as being on a microtubule-lacking twig |
The neuron/neuronlist object with axon/dendrite info assigned in SWC format to neuron$d
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