API for alexjgriffith/mulcal
To facilitate the analysis of multiple ChIP-Seq data sets
| Global functions | |
|---|---|
| IUPACtoBase | Man page |
| PWMtoCons | Man page |
| ascore | Man page |
| ascoreSeperation | Man page |
| batchscore | Man page |
| buildAnotations | Man page |
| combinations | Man page |
| compliment | Man page |
| consenusIUPAC | Man page |
| convertChroms | Man page |
| exonsfromGenome | Man page |
| geneAssoc | Man page |
| geneAssocFlip | Man page |
| geneAssocFlipAux | Man page |
| geneAssociation | Man page |
| genomeDomains | Man page |
| genomicRegions | Man page |
| geometricScore | Man page |
| getData | Man page |
| getHeights | Man page |
| getMin | Man page |
| getPileUp | Man page |
| hcTest | Man page |
| heightHist | Man page |
| hg19Sort | Man page |
| histVisualize | Man page |
| histWrapper | Man page |
| homerWrapper | Man page |
| htmlDoc | Man page |
| htmlGenerateMain | Man page |
| htmlImage | Man page |
| htmlTable | Man page |
| htmlTags | Man page |
| leneAssoc | Man page |
| loadBedFile | Man page |
| loadPWM | Man page |
| locHist | Man page |
| member | Man page |
| memberWrapper | Man page |
| minGene | Man page |
| motifHist | Man page |
| motifScoreFunction | Man page |
| motifString | Man page |
| motifTest | Man page |
| motifs2View | Man page |
| motifsFromPCA | Man page |
| mulcal | Man page |
| mulcal-package | Man page |
| nearestGene | Man page |
| numberIntersect | Man page |
| outputFile | Man page |
| partialSigMatrix | Man page |
| pcaAnalysis | Man page |
| pcaAnalysisTest | Man page |
| peakGeneRegions | Man page |
| pileUp | Man page |
| rankChroms | Man page |
| rotateList | Man page |
| scoreList | Man page |
| splitBlist | Man page |
| stackedContrib | Man page |
| stackedContrib2 | Man page |
| subset.nestedList | Man page |
| tags | Man page |
| testTags | Man page |
| testZero | Man page |
