htmlGenerateMain: html GenearateMain Generatates an html file to visualize...

In alexjgriffith/mulcal: To facilitate the analysis of multiple ChIP-Seq data sets

Description

html GenearateMain Generatates an html file to visualize motifs juxtaposed from one another

Usage

htmlGenerateMain(fileLocation, sets, shortNames, imageDirectory, n = 3,
  pScoreFile)

Examples

sets<-c("normal_not_normal.pwm", "abnormal_not_abnormal.pwm")
shortNames<-c("n_not_a","a_not_n")
fileLocation<-"~/Dropbox/temp-data/"
pScoreFile<-"/home/agriffith/Dropbox/temp-data/p-score_table_1.tab"
imageDirectory="/home/agriffith/Dropbox/temp-data/"
printFasta(fileLocation,sets,shortNames,imageDirectory)
write(htmlGenerateMain(fileLocation,sets,shortNames,imageDirectory,n=2),
      "a-score_other.html")

alexjgriffith/mulcal documentation built on May 10, 2019, 8:53 a.m.