ascoreSeperation: The Processing of PC values A utility designed to help...

In alexjgriffith/mulcal: To facilitate the analysis of multiple ChIP-Seq data sets

Description

The Processing of PC values A utility designed to help seperate a vector based on the mean and standard deviation of the data. For the most part ascoreSeparation will return a vector of logicals but funs such as "value" and "rank" return numerics.

Usage

ascoreSeperation(vect, fun, n = 1)

Arguments

vect	A vector of numerical values.
fun	A function which is used to sepearate memebers of the vector. "top" TRUE if greater than mean + n* standard deviation. "bottom" TRUE if less than mean - n* standard deviation. "nottop" TRUE if less than mean + n* standard deviation. "notbottom" TRUE if greater than mean - n* standard deviation. "middle" TRUE if within mean +/- n* standard deviation. "value" Returns the principle component of interest. "rank" Returns the ranks of the principle components.
n	The value which is used to adjust the standard deviation cut off.

Value

A vector of equal length to the parameter vect.

Author(s)

Alexander Griffith [e-mail]

Source

https://github.com/alexjgriffith/mulcal

alexjgriffith/mulcal documentation built on May 10, 2019, 8:53 a.m.