exonsfromGenome: Exons from Genome
In alexjgriffith/mulcal: To facilitate the analysis of multiple ChIP-Seq data sets
Description
Generates a bed file format for exons from a RefSeqGene set.
Usage
1
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exonsfromGenome(genome, chroms = c(1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13,
14, 15, 16, 17, 18, 19, 20, 21, 22))
Examples
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3
genome<-read.table("hg19.RefSeqGenes.csv",header=TRUE)
exonList<-exonsFromGenome(genomes)
write.table(exonLocs,"hg19.exonLocs",row.names=FALSE,col.names=FALSE,quote=FALSE,sep="\t")
alexjgriffith/mulcal documentation built on May 10, 2019, 8:53 a.m.
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Description
Generates a bed file format for exons from a RefSeqGene set.
Usage
1 2 | exonsfromGenome(genome, chroms = c(1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13,
14, 15, 16, 17, 18, 19, 20, 21, 22))
|
Examples
1 2 3 | genome<-read.table("hg19.RefSeqGenes.csv",header=TRUE)
exonList<-exonsFromGenome(genomes)
write.table(exonLocs,"hg19.exonLocs",row.names=FALSE,col.names=FALSE,quote=FALSE,sep="\t")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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