detect_paired: Detect if experiment is pair-ended.
In alexvpickering/rkal: Run, Import, and Export 'kallisto' Quantifications
View source: R/validate_pairs.R
detect_paired R Documentation
Detect if experiment is pair-ended.
Description
Detect if experiment is pair-ended.
Usage
detect_paired(fastq_id1s)
Arguments
fastq_id1s
Character vector of first sequence identifiers from
fastq.gz files. Returned from get_fastq_id1s.
Value
boolean indicating if experiement is pair-ended (TRUE) or
single-ended (FALSE).
Examples
fastq_paths <- system.file("testdata", "SRR12960930.400.fastq.gz",
package = "rkal"
)
fastq_id1s <- get_fastq_id1s(fastq_paths)
detect_paired(fastq_id1s)
alexvpickering/rkal documentation built on Nov. 27, 2022, 8:38 p.m.
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View source: R/validate_pairs.R
| detect_paired | R Documentation |
Detect if experiment is pair-ended.
Description
Detect if experiment is pair-ended.
Usage
detect_paired(fastq_id1s)
Arguments
fastq_id1s |
Character vector of first sequence identifiers from
fastq.gz files. Returned from |
Value
boolean indicating if experiement is pair-ended (TRUE) or
single-ended (FALSE).
Examples
fastq_paths <- system.file("testdata", "SRR12960930.400.fastq.gz",
package = "rkal"
)
fastq_id1s <- get_fastq_id1s(fastq_paths)
detect_paired(fastq_id1s)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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