filter_genes: Filter genes in RNA-seq ExpressionSet
In alexvpickering/rkal: Run, Import, and Export 'kallisto' Quantifications
filter_genes R Documentation
Filter genes in RNA-seq ExpressionSet
Description
Uses filterByExpr to filter based on 'counts' assay or 'exprs'
assay if 'counts' isn't available (for ARCHS4 data).
Usage
filter_genes(eset)
Arguments
eset
ExpressionSet with 'counts' assayDataElement and group column in
pData
Value
filtered eset
See Also
filterByExpr
alexvpickering/rkal documentation built on Nov. 27, 2022, 8:38 p.m.
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| filter_genes | R Documentation |
Filter genes in RNA-seq ExpressionSet
Description
Uses filterByExpr to filter based on 'counts' assay or 'exprs' assay if 'counts' isn't available (for ARCHS4 data).
Usage
filter_genes(eset)
Arguments
eset |
ExpressionSet with 'counts' assayDataElement and group column in pData |
Value
filtered eset
See Also
filterByExpr
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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