Files in alexvpickering/rkal
Run, Import, and Export 'kallisto' Quantifications

.Rbuildignore

.gitignore

DESCRIPTION

LICENSE

NAMESPACE

NEWS.md R/build_kallisto_index.R R/filter_genes.R R/get_quant_meta.R R/load_seq.R R/run_kallisto_bulk.R R/select_pairs.R R/validate_pairs.R README.md

inst/testdata/SRR12960930.400.fastq.gz

inst/testdata/SRR13202502.400_1.fastq.gz

inst/testdata/SRR13202502.400_2.fastq.gz

man/build_kallisto_index.Rd man/construct_eset.Rd man/detect_paired.Rd man/filter_genes.Rd man/get_fastq_id1s.Rd man/get_fastq_pairs.Rd man/get_kallisto_index.Rd man/get_pkg_version.Rd man/get_quant_meta.Rd man/get_vsd.Rd man/import_quants.Rd man/load_archs4_seq.Rd man/load_seq.Rd man/run_kallisto_bulk.Rd man/select_pairs.Rd man/setup_fdata.Rd man/validate_pairs.Rd man/validate_reps.Rd

rkal.Rproj

tests/testthat.R tests/testthat/test-detect_paired.R tests/testthat/test-get_quant_meta.R tests/testthat/test-validate_pairs.R

vignettes/.gitignore

vignettes/rkal.Rmd

alexvpickering/rkal documentation built on Nov. 27, 2022, 8:38 p.m.

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