cormat_to_edgelist: Transform a correlation matrix to an edge list
In almeidasilvaf/BioNERO: Biological Network Reconstruction Omnibus
cormat_to_edgelist R Documentation
Transform a correlation matrix to an edge list
Description
Transform a correlation matrix to an edge list
Usage
cormat_to_edgelist(matrix)
Arguments
matrix
Symmetrical correlation matrix.
Value
A 2-column data frame containing node 1, node 2 and edge weight.
Examples
data(filt.se)
cor_mat <- cor(t(SummarizedExperiment::assay(filt.se)))
edgelist <- cormat_to_edgelist(cor_mat)
almeidasilvaf/BioNERO documentation built on March 25, 2024, 9:14 p.m.
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| cormat_to_edgelist | R Documentation |
Transform a correlation matrix to an edge list
Description
Transform a correlation matrix to an edge list
Usage
cormat_to_edgelist(matrix)
Arguments
matrix |
Symmetrical correlation matrix. |
Value
A 2-column data frame containing node 1, node 2 and edge weight.
Examples
data(filt.se)
cor_mat <- cor(t(SummarizedExperiment::assay(filt.se)))
edgelist <- cormat_to_edgelist(cor_mat)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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