osa.se: Rice gene expression data from Shin et al., 2021.

In almeidasilvaf/BioNERO: Biological Network Reconstruction Omnibus

Rice gene expression data from Shin et al., 2021.

Description

Filtered expression data in transcripts per million (TPM) from Shin et al., 2021. Genes with TPM values <5 in more than 60 were removed to reduce package size. The expression data and associated sample metadata are stored in a SummarizedExperiment object.

Usage

data(osa.se)

Format

An object of class SummarizedExperiment

References

Shin, J., Marx, H., Richards, A., Vaneechoutte, D., Jayaraman, D., Maeda, J., ... & Roy, S. (2021). A network-based comparative framework to study conservation and divergence of proteomes in plant phylogenies. Nucleic Acids Research, 49(1), e3-e3.

Examples

data(osa.se)

almeidasilvaf/BioNERO documentation built on March 25, 2024, 9:14 p.m.