filt.se: Filtered maize gene expression data from Shin et al., 2021.

In almeidasilvaf/BioNERO: Biological Network Reconstruction Omnibus

Filtered maize gene expression data from Shin et al., 2021.

Description

Filtered expression data in transcripts per million (TPM) from Shin et al., 2021. This is the same data set described in zma.se, but it only contains the top 500 genes with the highest variances. This data set was created to be used in unit tests and examples.

Usage

data(filt.se)

Format

An object of class SummarizedExperiment

References

Shin, J., Marx, H., Richards, A., Vaneechoutte, D., Jayaraman, D., Maeda, J., ... & Roy, S. (2021). A network-based comparative framework to study conservation and divergence of proteomes in plant phylogenies. Nucleic Acids Research, 49(1), e3-e3.

Examples

data(filt.se)

almeidasilvaf/BioNERO documentation built on Oct. 9, 2024, 1:49 a.m.