read.fastq_to_df: Read a Fastq file and store it as a dataframe

In ambu-vijayan/baseq: Basic Sequence Processing Tool for Biological Data

Read a Fastq file and store it as a dataframe

Description

This function reads a Fastq file and stores it as a dataframe with three columns: Header, Sequence, and QualityScore.

Usage

read.fastq_to_df(fastq_file)

Arguments

fastq_file

A character string specifying the path to the Fastq file to be read.

Value

This function returns a dataframe with three columns: Header, Sequence, and QualityScore.

Examples

sample_file_path_two <- system.file("extdata", "sample_fq.fastq", package = "baseq")

read.fastq_to_df(sample_file_path_two)

ambu-vijayan/baseq documentation built on May 6, 2023, 10:31 p.m.