write.df_to_fasta: Write a data frame to a fasta file

In ambu-vijayan/baseq: Basic Sequence Processing Tool for Biological Data

Write a data frame to a fasta file

Description

This function writes a data frame to a fasta file with the same name as the data frame. The data frame is assumed to have two columns, "Header" and "Sequence", which represent the header and sequence lines of each fasta record, respectively.

Usage

write.df_to_fasta(df)

Arguments

df	A data frame containing fasta records with "Header" and "Sequence" columns.

Value

This function does not return a value, but writes a fasta file to the working directory.

Examples

sample_file_path <- system.file("extdata", "sample_fa.fasta", package = "baseq")
read.fasta_to_df(sample_file_path)

write.df_to_fasta(sample_fa)

ambu-vijayan/baseq documentation built on May 6, 2023, 10:31 p.m.