Files in ampatzia/pasaR
Pangenome Statistical Analysis for R
.Rbuildignore
.gitignore
.travis.yml
DESCRIPTION
LICENSE
NAMESPACE
R/cluster_number.R
R/cp_plot.R
R/data_docu.R
R/gp_plot.R
R/grid_plot.R
R/helper_functions.R
R/import_panm_data.R
R/import_panm_names.R
R/mg_plot.R
R/panm_summary.R
R/pm_binom.R
R/pm_chao.R
R/pm_cluster.R
R/pm_fluidity.R
R/pm_fluidity_all.R
R/pm_heaps.R
R/pm_plot.R
README.md
codecov.yml
data/bac_stre.rda
data/bac_stre_names.rda
man/bac_stre.Rd
man/bac_stre_names.Rd
man/binomixMachine.Rd
man/cluster_number.Rd
man/cp_plot.Rd
man/gp_plot.Rd
man/grid_plot.Rd
man/gtools_comb.Rd
man/make_panmatrix.Rd
man/make_panmatrix_fami.Rd
man/make_panmatrix_fami2.Rd
man/mg_plot.Rd
man/negTruncLogLike.Rd
man/org_names.Rd
man/org_names_fami2.Rd
man/organism_names_panmatrix_fami.Rd
man/panm_summary.Rd
man/pm_binom.Rd
man/pm_chao.Rd
man/pm_cluster.Rd
man/pm_fluidity.Rd
man/pm_fluidity_all.Rd
man/pm_heaps.Rd
man/pm_plot.Rd
pasaR.Rproj
tests/testthat.R
tests/testthat/test-cp_plot.R
tests/testthat/test-gp_plot.R
tests/testthat/test-mg_plot.R
tests/testthat/test-pm_plot.R
vignettes/Benchmark_Comparison.pdf
vignettes/Benchmark_Comparison.pdf.asis
vignettes/Pangenome_analysis_with_pasaR.pdf
vignettes/Pangenome_analysis_with_pasaR.pdf.asis
