mg_plot: Gene membership
In ampatzia/pasaR: Pangenome Statistical Analysis for R
Description
Usage
Arguments
Examples
Description
This function produces a genes - membership plot of the pangenome, i.e. the gene-cluster participation
frequency in the pangenome.
Usage
1
Arguments
Panmatrix
Panmatrix produced by make_panmatrix functions
collapsed
Defaults to True, sum the number of genes for all groups with more than
three times the number of the genomes explored
use_log
Logical,scales axis containing clusters with log, defaults to FALSE
Examples
1
## Not run: mg_plot(Panmatrix)
ampatzia/pasaR documentation built on May 12, 2019, 2:37 a.m.
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Description Usage Arguments Examples
Description
This function produces a genes - membership plot of the pangenome, i.e. the gene-cluster participation frequency in the pangenome.
Usage
1 |
Arguments
Panmatrix |
Panmatrix produced by make_panmatrix functions |
collapsed |
Defaults to True, sum the number of genes for all groups with more than three times the number of the genomes explored |
use_log |
Logical,scales axis containing clusters with log, defaults to FALSE |
Examples
1 | ## Not run: mg_plot(Panmatrix)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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