check_primer_trim: Check for valid inputs for fastPrimerTrim
In ananata/fastq2otu: FASTQ2OTU: Automate microbiome analyses
Description
Usage
Arguments
Value
Description
This function checks to see if "pathToBBduk", "listOfAdapters", "pathToRawFastq" and "pathToNoPrimers" parameters are present and valid. Missing or invalid inputs will cause an
error message to be displayed.
Usage
1
check_primer_trim(object)
Arguments
object
fastPrimerTrim-type S4 object
Value
TRUE (boolean) or error message detailing source(s) of error.
ananata/fastq2otu documentation built on Feb. 2, 2022, 4:20 p.m.
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Description Usage Arguments Value
Description
This function checks to see if "pathToBBduk", "listOfAdapters", "pathToRawFastq" and "pathToNoPrimers" parameters are present and valid. Missing or invalid inputs will cause an error message to be displayed.
Usage
1 | check_primer_trim(object)
|
Arguments
object |
fastPrimerTrim-type S4 object |
Value
TRUE (boolean) or error message detailing source(s) of error.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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